Siniperca chuatsi (mandarin fish): 122879840
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Entry
122879840 CDS
T08948
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122879840
04082 Neuroactive ligand signaling
122879840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122879840
Ion channels [BR:
schu04040
]
Ligand-gated channels
GABA-A
122879840
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
122879840
NCBI-ProteinID:
XP_044060250
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Position
LG8:complement(23295522..23328969)
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AA seq
455 aa
AA seq
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MWSRESASLLLFCLLALTALWKTRPVNADATSDAFKTNITLFTRILDSLLDGYDNRLRPG
LGDRITEVKTNIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFHGPMNILPLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTISEVTYAWTRNASDSVVVEGESSRLNQYDLLGQTVGQETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVTDKKKERASV
VKKNNAYAVAVANYAPNITKDSSTLPTIAKGGASDPNKAKADGKAQESKKTFNSVSKIDR
MSRILFPVLFGSFNLVYWATYLNREPVIKDMVPSN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcagagagagcgcttctctactcctcttctgcctgctggcgctcacagccctc
tggaaaaccaggccagtgaatgccgatgccacatctgatgcctttaaaaccaatatcacc
ctgttcacacggatcctggacagcctgctggatggatatgacaaccgtctacggcctggt
cttggggacaggataactgaagtgaagacaaacatctacgtcaccagctttggaccagtt
tcagacacagacatggagtacaccatagacgttttcttccggcaaagctggaaggatgag
aggttgaaatttcatggaccgatgaatattttgcccctcaacaacctgatggcaagtaaa
atctggactccagacaccttcttccacaatgggaaaaagtctgtggctcataacatgacc
atgcctaataaactgttgaggatcaaagatgatgggacactgctgtacaccatgaggtta
actgtgcatgcagagtgcccaatgcatctggaggatttccccatggactttcattcctgt
ccactaaaatttggcagctatgcctacacaatctcagaagtgacttatgcttggactcga
aatgcctccgactctgtggtggtggaaggagaaagctcccgcctgaaccagtatgacctg
cttggacaaacggtcggacaagaaactatcaaatcgagtacaggtgaatacacggtgatg
acggctcatttccatctgaagaggaagattggctactttgtcatccagacgtacctcccg
tgcatcatgacagtcattctctcccaagtgtctttttggttgaacagagaatcagtgcca
gctaggactgtgtttggtgtaaccactgttctcactatgacaacgctgagtataagtgcg
aggaactcccttcccaaggttgcctacgccactgccatggactggttcatcgctgtctgc
tacgccttcgtcttctccgctttgattgagtttgccactgtcaattacttcacaaagcgc
ggctgggcttgggatggaaagagtgttgtgaccgacaagaaaaaagagcgggcatctgtc
gtcaagaagaataatgcctacgctgtagcagtggccaactacgcgcctaatatcaccaag
gactccagcacacttccaactattgccaaaggtggagcttcggatcccaacaaggccaaa
gcagatggcaaagctcaagaaagcaagaagacattcaacagcgtcagcaaaattgacagg
atgtcaaggattttgtttccggttctctttggctccttcaaccttgtctactgggccacc
tacttaaacagagaacccgttataaaggatatggtcccctctaattag
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