Siniperca chuatsi (mandarin fish): 122879841
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Entry
122879841 CDS
T08948
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122879841 (gabra4)
04082 Neuroactive ligand signaling
122879841 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122879841 (gabra4)
Ion channels [BR:
schu04040
]
Ligand-gated channels
GABA-A
122879841 (gabra4)
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Hmw_CFAP97
Motif
Other DBs
NCBI-GeneID:
122879841
NCBI-ProteinID:
XP_044060251
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Position
LG8:complement(23342485..23380560)
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AA seq
556 aa
AA seq
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MVSAKKKETVTAMRPAFIRTLFYFFCLATCVKKISGQTRKDERIYPENFTRILDRLLDGY
DNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLMYEGPIEILRL
NNLMVTKVWTPDTFFRNGKKSVVHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLVDF
PMDGHACPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETIKSI
TGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQIERAKKKPAKCP
PVPRTTPVKVKDTEEALQQNPDTNGNLRKRMNYISQQESSSHQKAQSTTNISGVGRARAL
RPLASGANGSSSTLSRSSPKSESLLSVASSSAQLVKSTPQAAASTPDVMAGTPCKQNASA
TSLQHLLGPKLERIQMMGNKLELKQTPCSQPTTAGMGGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTVVAKGG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaagaaggagacggtgacagcgatgcgcccggcttttattcggacc
ctcttctactttttctgtttggcgacttgtgtaaagaaaatctctggacagacaaggaag
gatgaaaggatctatccggagaattttactcgcattttggaccgacttctggacggctat
gacaacaggctgcgacctggattcgggggtcctgtgactgaagtcaagaccgacatttat
gtgacaagttttgggcctgtctcagatgttgaaatggagtacacaatggacgtattcttt
cgacagacgtgggtggaccggaggttgatgtacgagggcccgatagagattttgaggctg
aacaacctgatggtgactaaagtgtggacaccagacaccttcttcaggaatggcaagaag
tcagtcgttcacaacatgacggcccccaacaagcttttccgcatcatgaagaatggcacc
attctctacaccatgaggttgactattagtgccgagtgtcccatgaagctcgtggacttc
cccatggatggacatgcgtgccccctcaagtttggaagctatgcctatcctaaaacagag
atgatctatacttggaccaaagggcctcagcattcagtggaggtccctcctgagtcctcc
agcctcgttcagtatgatctcatcggccagacggtctccagtgaaacgattaaatccatc
acaggtgaatatgtggtgatgacggtctacttccacttgaaacgtaaaatgggctacttc
atgattcagacgtatatcccctgcataatgacagtaatcctctcccaagtgtccttctgg
ataaataaagaatcggtcccggcacgcacagtcttcggcatcaccactgtcctgaccatg
acgacactcagtatcagcgctcgccattcccttcccaaggtctcatacgccactgcgatg
gactggttcatcgctgtctgcttcgccttcgtcttctctgccctcattgagttcgccgct
gtaaactacttcaccaacgcacagattgagcgggccaaaaagaagccggccaaatgtccc
ccggtgccccgaaccacacctgtcaaggtcaaggacacagaggaagcgctgcagcagaat
cctgataccaacggtaacctgagaaagcggatgaattatatttcccagcaagagtccagc
agtcaccagaaagcccagtccaccaccaacatttcgggagtgggaagagcgagagcgcta
cgacctttagccagtggagccaacggtagctcctccaccctctcccgctccagccccaaa
tctgagagcctgctcagcgtggcctcctcctctgcccagctggtgaagagtactccccag
gctgcagcttccacaccagacgtgatggcagggacgccgtgcaagcagaacgccagcgcc
acgtctctgcagcatctgctggggcccaagctggagcgcatccagatgatggggaacaaa
ctggagctaaagcagacgccgtgctcccagcccaccacggctggtatgggtggaaccagc
aaaattgacaagtatgcacgaatcctgttcccagtgtccttcggggcttttaatatggtc
tactgggtggtttacttatcaaaggacacagtggtggctaaaggtggctag
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