Siniperca chuatsi (mandarin fish): 122879858
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Entry
122879858 CDS
T08948
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122879858 (aff2)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122879858 (aff2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
122879858
NCBI-ProteinID:
XP_044060282
LinkDB
All DBs
Position
LG8:complement(23564440..23717892)
Genome browser
AA seq
1564 aa
AA seq
DB search
MDLFEFDFFRDWELEQPCHLESERSALKRREWERRNQEVQQDEDLFSTGFNLFGEPYKTN
KGDALASRVQNTLGSYEEMKDLLTSHSNQSHLVGIPKGSNNLQTPTTSTTERPAMESQLF
NEALRGGTGGGGGAEGGGDKRVGNASSSSSTSMQPPASTTSSSSATTLPHQNSKKSRSSM
DWSRSGHGQSTQGTGLVLGLGQNGQGQVTAATSGRGKMSLLEEQRHEELFSSLKDELGLK
GDSSPSSSTSSSSSSSSRRRHSSHPSKTLPLPDGGNFRSSTMDGGHFKSSTNTENGGHFK
SSPFENETGSHLSTSSSPLASTSVLTTPTPGLTTPTSGLTTPTFPPGSLSGKPIAVQQKP
TAYVRPMDGQDQAPSDSPQLKPPLVATEGFNNSQAYGGNSGNVKNKLPKLSLSHAGEVSL
PNDSSCVEEILREMTHSWPPPLTAIHTPGKVDQTKFPIPNKESQHVTSGYNTQKRCTVSA
NKPAAKPPTAPQKSMLEDDLKISSDEEEAEQKASDKPKARGTAVSGASGSSSESESSSES
DTDESESSSSDSEYNQASRTNTPEPEPPSTNKWQLDSWLNKVQAQTKPLVPPQQEHHGTG
SIAQGPDTFSPRSEAPGVGTAAKTKPCGSNSTPVPAAPTVEHKETRGAFCPGREKAKAKL
SQKASADGQRSKMRLSPGLLSGPEVTTPRRNTTGKKQPRRTERSNSVEDNQSQTWNRANQ
HSPAAREKDLLPPPSLEHPNPPRPRSKPPSGKTAPRKEPRSATNSNNNAVTPPAALQQIP
VPIPAVSVNQDKRKHRGPNTKITPKSREFIETDSSSSSSECQSDSEEAIKIPAVPPQTTR
SAINTQTLSNTHVHTPLLPCLASVSSMGSLGTFGGKGLRVKDGSNVTTNGSSSSNSSISS
GGNGGSNSCNSLSISNISGSFGTSVPDPGGLGGQCKDLESMSPPSNTGHEVPLSPLREYQ
EIQSLWVKIDLSLLSRVPGQGSGERSRAGIAERDGSEGRDRERQGEREKTGVAERERQKQ
EEREWPGLRERQKLPKGEKQEEENERLVQDRERQGDRDRLTERERQTDRERFGLGERERT
TGRDREKACQGLGVLDNPPVQEQSNPRLAARTERGENGGKHRRQAAGNIVVPTDKHTSKS
KRKHKSDHSESSVNGNKKLRLDKDCQLLPPCISPIHNHKNSSTDSSLNRKQARRRDEKLL
PPLLSPLSDDPPRKRTCDSSSSLSQEGGAAAALLPCSTSSTSTSSHRHRRGEGKASSHAR
NGSEVDLHGEKPSADGFHANGQSDSEVWSEPLMEPAESRRPRLSFSDTVHSADYYMQEAK
RLKHKADALMDKFGKAVNYADGALSFIECGNAMERDPLEAKSPYTMYSETVELIRYAMRL
KNFTSHSATVAEKKLAVLCNRCLSLLYLRMFHLKKDHAVKYSRSLMEYFKNSAKSSHQAP
SPWRTNGKVNGTPSPLSLSPSPASSGGGGGGAGGGSGSAPGSSGNVAIPQRIHHMAASHV
NITNNILRSYEHWETADRLATDSQEFFQELDLVMEPLSQQSSMTELVRYIRQGLHWLRIE
AHLL
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggatctctttgaattcgactttttcagagactgggagcttgaacaaccatgtcatctg
gagtcggagcgcagcgccctgaagaggagagagtgggagaggaggaaccaggaggtccaa
caggatgaagacctgttctcaactggattcaacttgtttggggaaccttataaaactaat
aaaggtgatgcattggccagtcgcgtccagaacacactgggctcctatgaagaaatgaaa
gacctattaaccagccattccaaccagagccacttggtgggaatccccaaaggcagcaac
aacctgcagaccccgaccacttcaacgacagagagacccgccatggagtcccagcttttc
aacgaagccctgagaggaggaacaggtggaggaggaggagcagaagggggtggggacaag
agggtgggaaatgcctcttcctcatcttcaacttccatgcaacctcctgcttcaaccaca
tcgtcatcaagcgccacaaccctcccacatcagaattcgaaaaagtcaagaagctccatg
gactggtcaaggtcaggccatggacagagtacccaaggaacaggcctcgttctggggcta
ggacagaatgggcaggggcaggtcacagcagctacgagtggaagagggaaaatgtcttta
ttagaggaacaaaggcatgaagagctgtttagctcacttaaagatgaactcggtctaaaa
ggagactcaagcccttcttcctccacttcgtcctcctcttcctcttcttctcggagaagg
cactcttcccacccctccaaaacccttcctctcccagatggtggcaattttcgatcttcc
accatggacggtggccattttaagtcttccactaacacagaaaatggtggacattttaaa
tcctccccatttgaaaatgagacgggttctcacctctctacatcctcctccccgctggct
tccacatcagttctgacgacgcctactcctggtctaaccacacccacatctggactgact
acccccaccttcccacctggtagcctatcagggaagccgatcgcagtgcagcaaaagccc
acagcgtatgttcgaccaatggatggtcaggaccaggcacctagtgactctccccagctt
aaaccccctctagtggccacagagggatttaacaacagtcaggcttacggaggaaactct
gggaatgtgaagaataaactgccaaaactgagtctcagccacgcaggggaggtcagccta
ccaaatgactccagctgtgttgaagagattttgcgggagatgacccattcctggccgcct
cctctcacagccatacacactcctgggaaggttgatcaaaccaagttccccatcccaaac
aaggagtcacagcatgtgacctcaggctacaacacccagaagcgatgtactgtatcagct
aacaagcctgctgctaaaccaccaactgcaccacagaagtcaatgttggaggatgacctg
aagatcagcagcgatgaggaagaggccgaacaaaaggcgtctgacaagcccaaagccaga
ggcacagccgtaagtggagcatcagggagcagcagtgaatcagagagcagctcagagtcg
gacacagacgaatcagagagcagctccagtgacagcgagtataatcaggcctcccgcaca
aacactccagagcctgagcccccctccactaacaagtggcagctggacagctggttgaat
aaggtccaagctcaaaccaaacccctggttccccctcagcaagaacatcatggcacaggc
tccatcgcccagggtccggacactttctctccaaggagtgaagcaccaggagtgggtacg
gctgccaagaccaagccctgcggatccaacagcacccctgttccagcggcaccaacagtg
gaacacaaggaaacaaggggagctttctgcccaggcagagagaaggccaaggccaagctc
agccagaaggcctcagcggatggccagaggtcaaagatgaggctgtcaccgggcctgttg
tcagggccagaggtcacgaccccaaggaggaacaccacagggaagaaacagcccaggcgg
acagagagatcaaacagtgtggaggataatcagagccagacatggaacagagcaaaccag
catagccctgcagctagggagaaggacctgttgccgcccccctccctggagcatccgaac
cccccgaggccacgaagcaaaccccccagtgggaaaacagcccccaggaaagaacctcgc
agtgctaccaactcaaacaacaacgcagttactccaccagcggcgctacagcaaatccct
gtgccaatacctgctgtcagtgtaaaccaggataagaggaaacacagaggtccaaacacc
aaaatcacacccaagtcccgagaattcatcgaaactgattcctcctcctcctcctctgaa
tgccagtcagattcagaggaagccatcaaaatccccgctgtgccacctcagaccacgcgc
tctgcgattaacacacagactctgtccaacacacatgtacacacgcctcttctcccatgc
ctggcctctgttagcagtatggggagtctggggacatttggagggaagggacttcgagtc
aaagatggtagcaatgtgaccactaatggtagcagtagtagtaatagtagcatcagcagt
ggtggtaatggcggcagtaatagctgtaactccctaagcattagcaacatcagtggttca
tttggaacttctgttcctgatcctggagggttaggaggacagtgcaaagacctggagtcc
atgtcaccaccttccaacacggggcatgaggtgcctctctcccccttgagggagtaccaa
gagatccagagtttatgggtgaaaattgacctgagtttgctcagcagggtgcctggccag
ggttcgggggaaagatccagagcaggaatcgcagaaagggatgggagcgaagggagagac
agagagagacagggggagagggagaagacaggggtggcagagagagaaagacagaagcag
gaagagagagagtggccagggctgagagagaggcagaagttacctaaaggggaaaaacag
gaagaagaaaatgagcgattagtgcaggacagagagaggcaaggtgacagagacagatta
acagagagagagaggcagacggacagagaaagatttgggcttggggagagggaaaggacg
acgggcagggacagagagaaggcatgccaaggtctgggggtcctggacaacccccctgtg
caagagcagagtaatcccaggctggctgcgaggacggagagaggagagaatggaggcaaa
cacaggaggcaggcagctggaaacatagtggtcccaacagacaaacacaccagcaagagc
aagaggaaacacaagtcggaccacagtgagtcatcagtcaacggcaataaaaagctgcga
ttggacaaagactgtcagctcctcccaccctgcatctctccaatacacaaccacaagaac
agctctacagatagctctctaaacaggaagcaggcgcgacggcgcgatgagaagctgctc
ccacccctcctgtcccccctctctgacgatccccctcgtaaacgaacctgtgacagcagt
tcctctctcagccaggagggcggcgccgctgctgcgttgctgccctgctccacctcttcc
acttccacttcctcacacaggcacaggagaggggaaggcaaggcgtcatcgcatgcgaga
aatggcagcgaagtggatctgcatggcgagaagcccagcgcagacggtttccatgccaac
ggacagtcagactcggaggtgtggtccgaacctctgatggaacctgccgaatctcgcagg
ccaagactgtcatttagcgacacagtccacagtgcagactactacatgcaggaggccaag
agactgaagcacaaggctgatgctttgatggacaaatttggtaaagcggtgaactacgca
gacggcgccctctccttcatagagtgtggaaacgctatggagcgagatccgctagaggcc
aaatcaccatataccatgtactctgagactgtggagctaatcaggtatgccatgaggttg
aagaacttcaccagccattcagccaccgtcgctgagaagaaactagctgtgttgtgtaac
cgctgtctgtctctgctgtatctgaggatgttccatctgaagaaagaccacgctgtcaag
tactcgcggtcgctcatggagtacttcaagaattccgccaagagttcccaccaggcaccc
tctccctggaggaccaatgggaaggtcaatgggactccatctcccctctcactcagcccc
tccccagccagcagcggaggaggaggtggaggagcaggaggaggatctggcagtgccccg
ggctcatctggaaatgtggctattccccagcggattcaccacatggctgccagtcacgtt
aatatcaccaacaacatcctgcggagctatgagcactgggagacggccgacagactggcc
actgatagccaagagttcttccaggagctggacttggtgatggaaccgttgagtcagcag
agcagcatgactgagctggtccgatacatcaggcagggtctgcactggctccgcatagag
gctcacctgctgtaa
DBGET
integrated database retrieval system