Siniperca chuatsi (mandarin fish): 122879860
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Entry
122879860 CDS
T08948
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
KO
K15516
fragile X mental retardation protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122879860 (fmr1)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122879860 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
122879860 (fmr1)
mRNA cycle factors
Stress granule specific factors
122879860 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_9
FXMRP1_C_core
Tudor_FRX1
FXMR_C2
Agenet
KH_1
Motif
Other DBs
NCBI-GeneID:
122879860
NCBI-ProteinID:
XP_044060285
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Position
LG8:complement(23724115..23747164)
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AA seq
617 aa
AA seq
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MDELVVEVRGTSGAFYKAFVKDVHEGSVTVAFENNWQPERQIPFQDVRFPPPTGSCKEIN
ESDEVEVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNPNKP
ATKSTFIKIRLDVPEDLRQMCSKESAHKDFKKAVGAFSVTYDSEKKQLVILSVNEVTTKR
ANMMSDMHFRSLRTKLSLMQRNEEASRQLESSRQLASRFHEQFAVRDDLMGLAIGTHGAN
IQQARKVPGVTNIDLDEETCTFHIYGEDQDAVRVARSFLEFSEDIIKVPRNLVGKVIGKN
GKLIQEVVDKSGVVRVRIEPENDKKPSAAVAAVAAAAADEGMVPFVFVGTKESISNATVL
LDYHLNYLKEVDQLRLERLQIDEQLRQIGGGGGGGGTGPRNLKDKTYVFDNGMGLGMGRG
AGGGGGGGGGGGGKPYAGGGGRGGRGRRGGGGAAFASGTNSEASNASETESDHKDELSDW
SLAPTEELMTGGGTLPRRTDGRKRAGGGGPRGRGGRGRGGGGYKGEDMQWSEPRPRHVRD
PKTRAQEDTLQIRVDSNNERSVQHSSGGRGGGGPSSSQGGISASGEGPSRHHHQRPIRDR
GMKKDKQDAPPLVNGVS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactagtcgtggaagtgaggggaacaagtggggccttttataaggcctttgtg
aaggatgttcacgaaggatcggtcactgtggcctttgaaaacaattggcagccagagcgt
cagatcccgttccaggatgtgcgttttcctcctccaacagggtcctgcaaagagataaat
gagagcgatgaggtcgaggtatattccagggctaatgacaaggagccatgtggatggtgg
ctggccaaggttcgcatggtcaaaggagagttttacgtaatagagtacgctgcatgtgac
gctacattaaatgagatagtgacgctggagcggttacggccggtcaatccgaataaacca
gccaccaaaagcaccttcatcaagatcagactggatgtacctgaggatctacggcagatg
tgctccaaggaatcagcacacaaagactttaaaaaggcagtgggagcgttcagtgtcacc
tacgactcggagaaaaagcagctggtcattttgtcggtgaatgaggtcacaacaaagcgg
gccaatatgatgagcgacatgcacttcaggagcctccgcaccaaactgtctctcatgcag
aggaacgaagaggccagcagacaactggagagttccagacagctggcgtcacggtttcat
gaacagtttgctgtccgggatgatctaatgggtctggccatcgggactcacggggccaac
attcagcaagcacgtaaagtccctggagtcactaacatagacctggatgaggagacatgc
acctttcacatatacggagaggaccaggatgcagtacgcgttgccaggagttttctggaa
ttctctgaagatatcatcaaagttccccggaacttagtagggaaggtgattggcaaaaac
ggtaaactgatccaggaagtggttgataagtctggggtggtgcgggttcgtattgagcct
gagaatgataaaaagccctcagcagcagtggcagcagtggcagcagcagcagcagacgag
ggaatggtgccatttgtatttgttgggaccaaggaaagcatctccaatgctacagtactg
ctggactaccacctcaactaccttaaggaggtggatcagcttcgtctggagcgtcttcag
attgacgagcagctgagacagataggagggggaggtggaggaggagggacggggcctcgg
aaccttaaagacaaaacctacgttttcgataacggcatggggctggggatggggagagga
gcaggaggaggaggaggaggtggaggaggaggaggagggaagccctacgcaggaggggga
ggaagaggtggcagagggcgaagaggaggaggaggtgcagctttcgcctcaggcaccaac
tcagaggcatccaacgcttcagagacggagtcggaccacaaagacgagctcagtgattgg
tcgctggcccccacagaggagctgatgacaggaggcgggaccctgcccagacggacagat
gggaggaagagagcaggcggaggagggccccggggacgaggagggagaggaagaggaggt
ggagggtataaaggtgaagacatgcagtggagtgagccaagacctcgtcatgtgagagac
cccaagacaagagcgcaggaagacactctacagatccgtgtggacagtaacaacgagcgt
agcgtgcagcactcctcaggggggcgaggaggaggagggccttcctcatcccagggtggc
atcagtgccagcggtgagggcccgtctcgccatcaccatcagagacccatcagagaccga
gggatgaagaaggacaaacaggacgctcctccgctggtgaacggagtgtcgtag
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