Siniperca chuatsi (mandarin fish): 122879875
Help
Entry
122879875 CDS
T08948
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122879875
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122879875
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122879875
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122879875
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Protocadherins
122879875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122879875
NCBI-ProteinID:
XP_044060313
LinkDB
All DBs
Position
LG1:12083380..12087887
Genome browser
AA seq
889 aa
AA seq
DB search
MFNSRHPSLSKRGGIWGLCILLLYTSPLSCFANFSHAKELIYKIKEGLPRGSFIGAIGVD
LNLDFTLEPPFLFSLPQKKVSEQYVKLNNTTGELYTSATEIDRETLCPDNSERQGCVLSL
DVFLLPQQYFQLVKVKIFIEDVNDNRPKFPVDEICMSVPENTPINARYAVEQSAVDPDLG
LHRVQTYWLVNDFGMFTLDVEENEGGELTPFLIVTEALDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFTETLINVTLHGNTTKGAHVARLHAFDPDFGANAQISYTYS
ERVPRDTRRLFHLDRITGVIKLAEKLDTGTATFYKLTILANGPGCIPAVATVTVHIIKVV
TGPPAIIPRYIAPEKDGVVTIKESELAFSPIAFFTIKNIDVNQRVDCHLDGTGPFRLGPY
QLFKNEYLLETTEPLDYEKTQEYELIVVANNTRELVIKTFLKVQVLDENDNAPVFQQSLV
KISVEENNPPNTFLTQLQATDQDSETRGEVIYLLGGDAPGIFVVDRMTGILTVTTSLDRE
EKETYRFIVRAVDQGTPRRESIATVVVTVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVTDADAGENGWVALSILNGSDIFMIDTGRGVLRAKTSLDREQQGTYQLWIEAIDGGEP
ALSCVTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTLPGTSITEVYAVDKDTGMNAVI
AYSIIKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVTDHGQPEPLYSTVMVNFF
VNETVSNESYIQSLLTREADIEIEERPWYIGQMTEGPERYALFPCQPVLIALSVACLGLF
FSVVTLTSYICCKRFKKHRKKRSEVEIPLKMKNDSMQVLNRKRRQISNN
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagcagacaccccagccttagcaaaagaggaggaatatggggattgtgcatc
ctcttgctttacaccagccctctttcctgttttgcaaatttcagccacgcaaaagagctc
atctataagataaaggagggattacccagggggagcttcataggagccattggagtagac
ttaaatttggatttcactcttgaacccccctttttatttagtcttccacaaaagaaggtc
agtgaacagtatgtgaagctaaataataccaccggggagctttacacatctgctacagag
attgacagggagaccctttgtcctgataactcggagcgacaaggatgtgtcctctcactg
gatgtgtttcttttgcctcagcaatactttcagctcgtcaaagttaagatctttattgag
gatgtgaacgacaacaggccaaagttccctgtggatgagatttgtatgtctgtcccagaa
aacacacccatcaatgctcgttatgcggtggagcagtctgcagttgacccggacctgggt
cttcacagagtgcagacctactggcttgttaatgactttggcatgttcacactggatgtt
gaggagaacgagggaggtgagctgacacccttcctcattgtgacagaggctttggacaga
gagacccaagctgaatacattacagatatcattgcagaggatggagggacccctcctcta
ctcggcgcggctactttaaaaattgtcatcacagatgtgaacgataactgcccccaattc
acagagacactaattaatgtcactctgcatgggaataccaccaaaggggcccatgtggca
cgtctgcatgcttttgaccctgactttggtgctaatgctcagatcagctatacttacagt
gaacgtgtgccaagggacaccaggagattgttccatttggacagaatcacaggggtgatc
aagctggcagagaaattagacactggaacagccacgttttacaaactcactattctggct
aatggacctggttgtatccctgctgttgccactgttactgtccatatcatcaaagttgtt
acaggaccccctgctatcataccccggtacattgcaccagaaaaggatggggtggtgaca
ataaaggagtctgagctagcattttctccaatagctttttttacaatcaaaaacattgat
gtgaaccaaagggtggactgtcatttagatgggactggtcctttcaggcttggcccctat
cagctgttcaagaacgaatacctactagagactacagagcctttggactatgagaagaca
caggagtatgagctaattgtggttgctaataatactcgagaacttgtcatcaagaccttc
ctcaaggtgcaggtattggatgagaatgataacgcaccagtgtttcagcagtctttggtg
aaaatatctgtggaggagaacaatccgccaaatacttttctgacccagctccaagccaca
gaccaggacagcgaaacccgaggggaagtcatctacctccttggaggtgacgccccaggg
atttttgttgtggatcgcatgacaggtatcctgactgtgaccacatcgctagaccgtgag
gagaaagagacataccggttcatagtgagagcagtggaccaggggacacccaggagagag
tcgattgcaactgtggtggtgaccgtgcaagaccgtaatgacaacagtccacgcttcatc
aataaggacttcacgttttttgtgccagagaacttcccggggtatggtgagattggggtc
ctctctgtgacagatgctgatgctggggaaaatggttgggtggccctttccatcctcaac
ggcagcgacatcttcatgatcgacacaggccgaggggtgctaagggccaagacatcactg
gaccgtgagcaacaagggacataccagctgtggattgaggccatcgatggtggggaacct
gcgctttcctgtgttactatggtgaccgtgctgttgttggatgtaaatgacaacccacct
attgtcctctttcctcagtccaatcagtcttacatgctagtactacccaatacactccca
ggaacatcaatcacagaggtctacgctgtggataaggatacaggtatgaatgctgtgatc
gcctatagtatcattaagaggaaaggtggcgagccagggtcatttgccattgacccagaa
acaggaaatatcacattaaagagggagctcagcaaccggggcctctacagccttctggtg
aaggtcactgatcatggtcagcctgaaccgctttactcaacagtcatggttaactttttt
gtcaatgaaacagtgagcaacgagagctacatccagagtctgctgaccagagaggctgac
attgagatagaggagaggccctggtacattggccagatgacagaggggcctgagaggtat
gcgttgttcccctgtcaacctgtcctcattgctctgtcagtggcatgtctggggctgttc
ttctcagttgttacactgacatcttacatatgctgtaagagatttaaaaagcacagaaag
aaaagatcagaagtagagatacctttaaaaatgaagaatgactcaatgcaagtactgaac
agaaagcgcaggcaaatctcaaacaactga
DBGET
integrated database retrieval system
