Siniperca chuatsi (mandarin fish): 122879943
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Entry
122879943 CDS
T08948
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122879943 (cdhr5a)
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Cadherin related
122879943 (cdhr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122879943
NCBI-ProteinID:
XP_044060529
LinkDB
All DBs
Position
LG1:3681269..3697671
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AA seq
710 aa
AA seq
DB search
MELKWKSKPVNVLLGCMVAVCFCTVCPAARLCTVPPGPVTIPENNTADVQLIKISSSSDV
TLTITVNPQDLFYLYGNALMVKKGLDYESLSSAALVVWVQCSRAGSRSVNESVEVLVENV
NDNPPNFAQTHFVLEVNELTPVNSSVGLIEATDVDSEPLYYRLESATQDKYFRLENINTP
KILVKSILDYDVVQKISLVLHVQDTFNGSASNEPFFTSVATITVHVKDVDNRPPWFQPCL
RANLGIAKLCVSAGYRGKVNLTEKEEGPLVLEPGPVFAKDGDKNRSEQISYRILRGNEGN
IFQIDEETGNITMAKAADIVGPITLTVLASQVTNRDQFAVTQVTIEVMKKSRNPPRFEKE
RYEGFIYSNSVPESMILRDRSTNRPFRVRARDEDFAAGMNPDVKYEVQYSSYVNVTSDGF
VILKRVVKTESFALQLRAVDTTTGEFGTAALSVQVIPAVAIPSPSNVGYRPGDMALLGLV
MAALLVLCVIVIGFLISRLSKGNASMDKICECLGPCLKSDQPRSGHRDSLQYTNDGFQNE
GDPSRGGARRWNNALPRRSTFPGSRGRVIPLERRSRHCSSCGVYTNHVPKGSPSARPSRR
GRGDADEYSMRSILTKQRRKEGQKTVWFKESEDSSDIEVEIIPDTVGRVEEETQEELEGE
VEMEGVVRDPAAPLRESDGGQESQSTEPSEKQDHGNTRSEKKKGSQEQEG
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaatggaagagcaaacctgtgaacgttctcctcggatgcatggtggccgtc
tgcttttgtacagtttgtccagctgcaagactttgcacggttcctccgggccccgtgacg
atcccagaaaacaacacggctgacgtccagctgataaagatcagctccagcagtgatgta
acactgacgatcacggtgaatcctcaagatctgttctacctgtatgggaacgccctgatg
gtaaagaaaggactggactatgagtcattgtccagtgcagctctggtggtgtgggtgcag
tgcagcagagccggctccagatctgtgaacgagtctgttgaggttttggttgaaaatgtg
aatgataaccccccaaactttgcacaaacccatttcgtactagaagtgaacgagctcacg
ccagtcaactccagcgttggactgattgaagcaacagacgttgattcagagccgttgtac
tatcgcttagagtctgcaacacaggataaatacttccgcctggaaaacatcaacactcca
aagatacttgttaaaagcatcctggactacgatgttgtacagaagatctctctggtttta
catgttcaggatacgttcaatggttcggcctccaacgagcccttcttcacatctgtggcc
accatcacggtgcacgtgaaggacgttgataaccggcccccgtggtttcagccttgtttg
agggccaatttaggaatcgccaaactgtgtgtgagcgccggctacagaggaaaagtcaat
ctcactgagaaggaggaggggccgttagtgctggagccaggtccggtgttcgccaaggac
ggagacaagaacaggagcgagcagatcagctacagaatactccgaggaaatgagggaaat
attttccagattgatgaggaaacaggaaacatcaccatggctaaagctgctgacatcgtc
ggcccaataactctcactgttctggcgtcacaggtgaccaacagggatcagtttgctgtg
acgcaggtgaccatcgaggtgatgaagaagagcaggaaccctcctcgctttgagaaggag
cgatacgaaggatttatctacagcaactcggttcccgagagcatgatcctccgagaccga
agcaccaaccggcccttcagggtccgagctcgggacgaggacttcgccgctggtatgaat
ccagatgtgaagtatgaggttcagtacagcagctacgtcaacgtgacctcagacggtttt
gtgatcctgaagagagttgtgaagacggagtccttcgcgcttcagctcagagcagtggac
acaacaacaggggagtttggaacagctgccctctctgttcaggtcatacctgcggtggcc
atcccgtctccctcaaacgtcggctaccgtccgggcgacatggcgcttctgggtctggtc
atggcagctctgctggtcctctgcgtcattgtgattggcttcttgatttcccgcttgtcg
aagggaaatgccagcatggacaaaatatgtgagtgcctgggcccctgcctgaagtccgac
cagccccggtccggccacagggactccctgcagtacaccaacgatggcttccagaatgag
ggcgacccgagccgtgggggtgccaggcgctggaacaacgctctccccagacggagcacc
ttccctggatcacgaggccgggtcatccccctggagagacggagccgccactgctcctcc
tgtggcgtctacaccaaccacgtccccaaggggagcccctcagcgagaccgtccaggaga
gggagaggagacgccgatgagtacagcatgaggtcgatcctgaccaagcagaggaggaaa
gagggccagaagacggtgtggttcaaggagagcgaggactcctctgacatcgaggtggag
attatcccagacactgtgggccgggtggaggaggagactcaggaggagctggagggggag
gtggagatggagggggttgtcagagacccggcagcaccgctgagagagtctgacggcggg
caggagagccagagcacagaacccagcgagaagcaggaccacggaaacaccaggtcagaa
aaaaagaagggaagccaggagcaggagggctga
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