Siniperca chuatsi (mandarin fish): 122879972
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Entry
122879972 CDS
T08948
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122879972 (gabra6a)
04082 Neuroactive ligand signaling
122879972 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122879972 (gabra6a)
Ion channels [BR:
schu04040
]
Ligand-gated channels
GABA-A
122879972 (gabra6a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
60KD_IMP
Motif
Other DBs
NCBI-GeneID:
122879972
NCBI-ProteinID:
XP_044060594
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Position
LG8:complement(18217876..18225775)
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AA seq
450 aa
AA seq
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MLPRMAFLIITLVTFICWISLGNVSGNEKIYSDNITRILDRLLDGYDNRLRPGSGGGVTE
VKTDIFVTSFGPVSDVEMEYTMDMFFRQMWVDERLKFEGHTEILRLNNRMVDKIWTPDTF
FRNSRKSISHNTTTPNKLFRIMQNGTVLYTMRLTISTECPMSLMDFPMDGHTCPLRFGSY
AYTSSEIMFTWRKGPIASVECPTESMSLLQYDLVGQTLSSEIFKSNTGHYSVQVVHFHLQ
RKLGYYLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARQSLPKV
AYATAMDWFIAVCFAFVASALVEFAAVNYFATIQANRLKKQKARQDKLEVLATGSEDGDT
VSSDSSPQEGLKRRNHSVSRSEPGDAPPLLIFLQQGSAFPQIPQLAGTSPIDKYARVLFP
LAFALFNLVYWYIYLAKDTMERARDAVLKN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccaggatggctttcctgataataactttagttacttttatctgctggataagt
cttggtaatgtaagtggaaatgagaagatttactcggacaacatcactcgcattttggat
cgacttttggatggttatgacaacagactgcgacctggatctggaggtggtgtcacagag
gtgaaaacagacatctttgtcaccagctttggacctgtttcagatgttgagatggagtac
accatggacatgttcttccgtcagatgtgggttgacgagcggctaaaattcgagggccac
actgaaatcctgcggttgaacaatcgcatggtggacaagatctggacgcctgacactttc
ttccgaaactccaggaaatccatttctcataacacgaccacacctaacaaactcttccgc
atcatgcagaacgggactgtcctctacaccatgagactgacaatcagcacagagtgtcca
atgagcctgatggacttccccatggacggccatacttgtcctctcaggtttggaagctat
gcctacacgagcagtgaaatcatgttcacttggcggaaggggccaatagcatctgtcgag
tgtcccacggagtccatgagtcttctgcagtatgatcttgtgggacagacgttgtccagt
gagatattcaaatcaaacacaggtcactactctgtgcaggttgtccatttccacctccag
aggaagctgggctactacctcatacagacttacatccctcttataatggtcgttgtgctg
tcacaagtctctttttggatcaacaaagagtctgttcctgcacgcacagttgctggcatc
accacagtgctgaccatgaccaccttgagcatcagcgcccgtcagtcacttcccaaagta
gcctatgccaccgctatggattggtttattgctgtgtgttttgcctttgtggcgtcagct
ctcgtcgagtttgcagcagtaaattactttgccaccatccaggccaaccgtctgaagaag
cagaaagctagacaagacaagcttgaagtgttggctacaggcagcgaagatggcgacaca
gtttcgtcggacagcagccctcaggaaggcctgaagaggagaaaccactcagtgagtcgc
agtgagccaggagatgctccgccactgctgattttcctccagcagggctcagcttttcct
caaatcccgcagctggccggcaccagccccatcgacaagtacgcccgtgtcctcttcccc
ctggccttcgccctcttcaacctagtctactggtacatctacctggccaaggacaccatg
gagagggccagggatgcagttcttaaaaactaa
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