Siniperca chuatsi (mandarin fish): 122880172
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Entry
122880172 CDS
T08948
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
KO
K10752
histone-binding protein RBBP4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03082
ATP-dependent chromatin remodeling
schu03083
Polycomb repressive complex
schu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122880172 (rbb4l)
03083 Polycomb repressive complex
122880172 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
122880172 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122880172 (rbb4l)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122880172 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
122880172 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
122880172 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122880172 (rbb4l)
PRC2.2
122880172 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122880172 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
122880172 (rbb4l)
Chromatin remodeling factors
NuRD complex
122880172 (rbb4l)
NuRF complex
122880172 (rbb4l)
NuRF complex (fruit fly)
122880172 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_DCAF12
WD40_RFWD3
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
122880172
NCBI-ProteinID:
XP_044060963
LinkDB
All DBs
Position
LG1:36006438..36030848
Genome browser
AA seq
426 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY
TIHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI
NHEGEVNRARYMPQNHCIIATKTPTSDVLVFDYNKHPSKPDPSGECSPDLRLKGHQKEGY
GLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHES
LFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPASE
LEAQGS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagaggtgtatgatgatgcagtggaagaaagggtcatcaatgaggagtac
aagatttggaagaaaaacacacctttcctgtacgacctggtgatgactcatgcactggag
tggcccagccttactgtccagtggcttccagatgtcagcaggccagaggggaaggactac
accattcacaggctggttttggggacccatacttcagatgagcagaatcaccttgtgatt
gccagcgtccaggtaccaaatgacgatgcccagtttgacgcctcacactatgacagcgag
aaaggagagtttggtggatttggttcagtaagtggaaaaatagagatcgagatcaaaatc
aatcacgagggagaggtgaatcgagcccgctacatgccccagaatcactgcatcattgcc
accaagacccccacctctgacgttctggtcttcgactacaataagcacccgtctaagcca
gatcccagtggggagtgtagtcctgacttgaggctgaaaggccaccagaaagaagggtat
ggtctttcctggaatcccaacctcagtggcaacctactcagtgcctccgatgaccatacc
atctgtctatgggacatcggggccggcccaaaggaagggaagattgtggatgccaagacc
atcttcaccggccacacagcggtggtggaagatgtttcctggcatttgctccacgaatcc
ctgtttggctcagtggctgatgaccagaaactcatgatatgggacactcggtccaacaac
acatccaaagccagccactcagtagacgctcacactgctgaggttaactgtctgagcttc
aacccctacagcgagttcattcttgccactggttctgctgataagactgttgcactgtgg
gatctaaggaacctcaaactgaagctccactcctttgagtcccacaaagatgaaattttc
caggtacaatggtctcctcacaatgagacgatcctggcctccagcggcaccgaccgacgt
ctcaatgtctgggatctcagtaaaatcggggaggagcagtcagcagaagatgctgaggat
ggcccaccggagctgctgttcatccacggtggccacacagccaagatctctgacttctcc
tggaaccccaatgaaccctgggtcatctgctcagtgtccgaggacaacatcatgcaagtc
tggcagatggcggagaatatctacaatgatgaggagccagacaacacccctgcatcagag
ctggaggctcagggatcataa
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