KEGG   Siniperca chuatsi (mandarin fish): 122880172
Entry
122880172         CDS       T08948                                 
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
  KO
K10752  histone-binding protein RBBP4
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03082  ATP-dependent chromatin remodeling
schu03083  Polycomb repressive complex
schu04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122880172 (rbb4l)
   03083 Polycomb repressive complex
    122880172 (rbb4l)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    122880172 (rbb4l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:schu03036]
    122880172 (rbb4l)
Chromosome and associated proteins [BR:schu03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     122880172 (rbb4l)
  Histone modification proteins
   HAT complexes
    HATB complex
     122880172 (rbb4l)
   HDAC complexes
    Sin3A-HDAC complex
     122880172 (rbb4l)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     122880172 (rbb4l)
    PRC2.2
     122880172 (rbb4l)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     122880172 (rbb4l)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    122880172 (rbb4l)
  Chromatin remodeling factors
   NuRD complex
    122880172 (rbb4l)
   NuRF complex
    122880172 (rbb4l)
   NuRF complex (fruit fly)
    122880172 (rbb4l)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_DCAF12 WD40_RFWD3 eIF2A Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SPT8 MIOS_WD40 NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 122880172
NCBI-ProteinID: XP_044060963
LinkDB
Position
LG1:36006438..36030848
AA seq 426 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDY
TIHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI
NHEGEVNRARYMPQNHCIIATKTPTSDVLVFDYNKHPSKPDPSGECSPDLRLKGHQKEGY
GLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHES
LFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPASE
LEAQGS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggctgataaagaggtgtatgatgatgcagtggaagaaagggtcatcaatgaggagtac
aagatttggaagaaaaacacacctttcctgtacgacctggtgatgactcatgcactggag
tggcccagccttactgtccagtggcttccagatgtcagcaggccagaggggaaggactac
accattcacaggctggttttggggacccatacttcagatgagcagaatcaccttgtgatt
gccagcgtccaggtaccaaatgacgatgcccagtttgacgcctcacactatgacagcgag
aaaggagagtttggtggatttggttcagtaagtggaaaaatagagatcgagatcaaaatc
aatcacgagggagaggtgaatcgagcccgctacatgccccagaatcactgcatcattgcc
accaagacccccacctctgacgttctggtcttcgactacaataagcacccgtctaagcca
gatcccagtggggagtgtagtcctgacttgaggctgaaaggccaccagaaagaagggtat
ggtctttcctggaatcccaacctcagtggcaacctactcagtgcctccgatgaccatacc
atctgtctatgggacatcggggccggcccaaaggaagggaagattgtggatgccaagacc
atcttcaccggccacacagcggtggtggaagatgtttcctggcatttgctccacgaatcc
ctgtttggctcagtggctgatgaccagaaactcatgatatgggacactcggtccaacaac
acatccaaagccagccactcagtagacgctcacactgctgaggttaactgtctgagcttc
aacccctacagcgagttcattcttgccactggttctgctgataagactgttgcactgtgg
gatctaaggaacctcaaactgaagctccactcctttgagtcccacaaagatgaaattttc
caggtacaatggtctcctcacaatgagacgatcctggcctccagcggcaccgaccgacgt
ctcaatgtctgggatctcagtaaaatcggggaggagcagtcagcagaagatgctgaggat
ggcccaccggagctgctgttcatccacggtggccacacagccaagatctctgacttctcc
tggaaccccaatgaaccctgggtcatctgctcagtgtccgaggacaacatcatgcaagtc
tggcagatggcggagaatatctacaatgatgaggagccagacaacacccctgcatcagag
ctggaggctcagggatcataa

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