KEGG   Siniperca chuatsi (mandarin fish): 122880181
Entry
122880181         CDS       T08948                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:schu04121]
    122880181 (rnf4)
Enzymes [BR:schu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122880181 (rnf4)
Ubiquitin system [BR:schu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122880181 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_4 zf_RING_Vps8 zf-rbx1 Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 Rtf2 zf-UDP zf-RING_11 IBR_1 TRAF3_RING zf-RING_6 zf-RING_10 zf-RING_16 zf-C3HC4_5 zf-ANAPC11 DZR
Other DBs
NCBI-GeneID: 122880181
NCBI-ProteinID: XP_044060971
LinkDB
Position
LG8:65410..70889
AA seq 214 aa
MSSSAQRKRRTAGSPLVSRPSTKTSRGANTRRTANASIAANANRIANRTANVSRTSDGDP
APPTETIDVMDNTEDSVEEVVDLTCEGSEAAVVDLTNNDSVLLVDEGPHNRRVPTGESYV
VSSDEDEDPPPVLNAAVMSSLHASSSSRSTPGTISCPVCLDSYSEIVESGRLVVSTKCGH
VFCSQCLRDALTSSHTCPTCRKRLTHRQYHPLYI
NT seq 645 nt   +upstreamnt  +downstreamnt
atgagcagctctgctcagaggaagaggaggaccgcaggaagtcctctggtttccagaccc
agcaccaagaccagcagaggggctaacactaggaggacggctaacgctagcatagcggct
aacgctaacagaatagctaacaggacagctaacgttagcaggacatctgacggtgaccct
gcccctcccacagagaccatcgatgtgatggacaacactgaggacagtgtggaggaggtg
gtggatctgacctgtgagggatcagaagctgctgtggtcgacctgaccaacaacgactca
gtactgctggtggacgaaggtcctcataacaggagagtccccacaggtgagagttacgtc
gtcagcagtgatgaagacgaggacccgccccccgtcctgaacgctgcagtcatgtcctct
ctacacgccagcagctcctccaggtcgactccggggacgatcagctgtcccgtctgtctg
gactcgtactctgagattgtagagagcggccgattggttgtttccactaaatgtggtcac
gtgttctgcagccagtgtctacgagatgctctgacatcatcacacacctgtcctacctgc
aggaagagactgacccaccgccagtaccatcccctctacatctga

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