Siniperca chuatsi (mandarin fish): 122880324
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Entry
122880324 CDS
T08948
Name
(RefSeq) cyclic nucleotide-gated cation channel-like
KO
K04949
cyclic nucleotide gated channel alpha 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122880324
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122880324
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
122880324
NCBI-ProteinID:
XP_044061275
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Position
LG8:complement(24558079..24567343)
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AA seq
679 aa
AA seq
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MTSPVQDSHRLSVKTWTEEESDRADSTLSRAQSMCDDTSSELQRMAAIDRRDVNSQNSFR
GRGALSRIVSMVMTLREWAQKSLAEETERPDSFLERFRGPAQMDTQAPPSRFSHSHAGSD
ADNEIRRSRRTRRKCNVVVLSPSDDAYYHWLMVIGAAVFYNWTLLVVRACFDDLQMKNVL
VWLVLDYICDGVYILDIAVRLHTGFLDQGLMVKDVRRLRETYVRTPQCKIDICSILPTDL
LYLTVGISYTPLLRFNRLLRLPRLFELFERTETRTGYPNAFRICKLVLYILVIIHWNACA
YYSFSKVLGLGSDSWVYPNASDPEFGSLTRSYIYCLYWSTLTLTTIGETPPPVRDEEYLF
LIFDFLVGVLIFASIVGNVGAMISNMNATRAAFQSRVDTLKHYMHFRHVSKVLEQRVIRW
FDYLWTNQKTIDEQEVLRSLPNKLRAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRP
QVFSPGDYICRKGDVGKEMYIIKDGQLAVVGEDGVTQFAVLTSGSCFGEISILNISGSKM
GNRRTANIRSLGYSDLFCLSKQDLMEALQEFPHARAQLEQRGRDILRKEGLLEEVNVSAG
EQLEEKVERLETSLDRLQTCLARLQSEFNSSQLRLKQRITTLEHNITTVATGSGFLSDAD
GNESVSGGDGVRSEINIRL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtccagtgcaggattcacacaggctgtctgtgaagacatggacagaggaggag
agcgaccgagctgacagcacacttagcagagcgcagtcgatgtgtgatgacacttcttca
gagcttcagagaatggcggccattgacagaagagatgttaattcccagaattcctttcgt
gggcgaggtgctctgtccaggatagtaagcatggtgatgactctgagagaatgggcacag
aagagtttggctgaggagacggagcgaccggattccttcttggaacgttttcgaggcccc
gcccaaatggacacgcaggccccgcccagcaggttcagccacagtcacgctggctctgat
gcagataacgaaatcagacgttccagacgcacgaggaggaagtgtaatgtcgtggtctta
tcaccatctgatgatgcatactaccactggctgatggtgattggtgctgctgttttttat
aactggaccctcctagttgtcagggcctgtttcgatgatctccagatgaagaatgtgttg
gtgtggttggtactggactacatctgtgatggagtctatatcctggatatagctgttcgt
ctccacacaggtttcttggatcaaggcttgatggtgaaagatgtgcggcgtctgagagaa
acctacgttcgaaccccacagtgtaaaattgacatttgctccatccttccaactgacctc
ctgtacctgaccgttggaatcagctacactccccttctccgattcaaccggctgctgcgt
ctgccacgtctgtttgagttgtttgaacgtacagagacgcgaacaggctaccccaacgct
ttccgcatctgtaaactggttctgtacatcctggtgatcatccactggaacgcctgtgca
tactacagcttctccaaggtcctgggactgggctctgattcttgggtttatccaaatgca
tcggatcctgagtttggttccctgaccagaagttacatatattgtctgtactggtccact
ctgacactgaccaccattggagagacacctcctcctgtaagagatgaggaatatttgttc
ctgatatttgacttcctggtcggcgttctgatttttgcctccattgtgggtaatgttgga
gccatgatctccaatatgaatgccacgcgagcagcctttcagagccgtgtagacaccctg
aaacactacatgcacttcagacatgtaagcaaggtgctagagcagcgcgtcatccgctgg
tttgactacctctggaccaatcagaagacaatagatgaacaggaagtgctgaggagcctg
cccaataaactgagagcagagattgctattaatgttcacctggacacactgaagaaggtg
cgtattttccaggactgtgaggcaggcctcctcgtagaattggtattaaaacttcgacca
caggttttcagtcctggagactacatctgtagaaagggagatgtgggtaaggagatgtac
ataattaaagatggccagctggcagttgtaggggaggatggagtcacccagttcgctgtt
ctgacctcaggaagctgcttcggagaaattagcatccttaacatcagcggcagcaagatg
gggaaccgacgtacggctaatattcgcagtctgggatactcagacttgttctgcctttcc
aaacaagacctgatggaggcgcttcaggagttcccccacgccagggcccagctggagcag
agggggcgggacatcctgcggaaggaggggcttctggaggaagtaaacgtgtctgcaggg
gagcagctcgaggagaaggtggagaggttggaaaccagtctggatcggctacagacgtgt
ttggcccgtctgcagagtgagttcaactcttcccagcttcgactgaagcagcgaatcaca
accctcgaacacaacatcaccacagtagccacaggcagcggcttcctgtcagacgccgac
ggcaacgagagtgtttctggtggtgacggtgtgcgcagtgaaatcaacatccggctctga
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