Siniperca chuatsi (mandarin fish): 122880338 Help Entry 122880338         CDS       T08948                                  Symbol prpf19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism schu  Siniperca chuatsi (mandarin fish) Pathway schu03040   Spliceosome schu04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:schu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     122880338 (prpf19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     122880338 (prpf19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:schu03041]     122880338 (prpf19)    04121 Ubiquitin system [BR:schu04121]     122880338 (prpf19)    03400 DNA repair and recombination proteins [BR:schu03400]     122880338 (prpf19) Enzymes [BR:schu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      122880338 (prpf19) Spliceosome [BR:schu03041]  Complex B   Other components    Prp19 complex     122880338 (prpf19)  Complex C    Prp19-CDC5 complex     122880338 (prpf19) Ubiquitin system [BR:schu04121]  Ubiquitin ligases (E3)   U-box type E3    122880338 (prpf19) DNA repair and recombination proteins [BR:schu03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     122880338 (prpf19) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Prp19 Beta-prop_WDR3_2nd WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Aladin Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_WDR19_1st PEP5_VPS11_N WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SPT8 U-box Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_VPS8 PROPPIN Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N eIF2A B-prop_COPA_B_2nd Tricorn_2nd Cytochrom_D1 Ge1_WD40 zf-Nse Cep57_MT_bd ATG16 Motif Other DBs NCBI-GeneID:  122880338 NCBI-ProteinID:  XP_044061302 LinkDB All DBs Position LG8:complement(16870182..16876154) Genome browser AA seq 505 aa AA seqDB search MSLVCAISNEVPEHPCVSPVSNQVFERRLIEKYIAENGTDPMNGQPLSEEQLVDIKVSHP IRPKAPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLIAPQAVPTSQPAAAGAGGEPMEISEQVGMTPEIIQKLQDK ATILTTERKKRGKTVPEELVRAEDLTKYRQVASHAGLHSASVPGILALDLCPSDTNKVLT GGADKNVVVFDKKEEQIVATLKGHTKKVTSVIYHPSQSVVFSASPDNTIRVWSVTGGNCI QVVRAHDAGVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDESAGCALTCAQFH PDGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTSIAFSENGYYLATGAQDSSLKLW DLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFTDHTGLVT GVAFGENAQFLTSAGMDRSLKFYSL NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgtctttggtttgtgcaatctccaacgaggtgccggagcacccatgcgtctctccggtg tccaaccaggtgtttgaacgcaggctgatcgagaagtacatcgcagagaatgggacggac cccatgaacggacagcccttgtcggaagaacagctcgtagatatcaaagtgtcccatcct attagaccaaaggcaccatcagcaacaagcattcctgccattctcaagtcccttcaagat gagtgggatgctgttatgcttcacagtttcaccctgcggcaacagctgcagactactcgc caagaactgtcacacgccctctaccaacatgatgccgcctgcagagtcatcgctcgactc accaaagaggtcactgctgcgagagaagctcttgccacactcaaaccccaagctggattg attgcccctcaggcagtccccacctctcagccagctgcagcgggtgctggtggagagcct atggaaattagtgaacaggtgggaatgactccagagatcatccaaaagctccaagacaaa gctactatcctcactacagaaagaaagaagagaggaaaaaccgtgccagaggagctggtt agagccgaggatcttaccaaatatcggcaagtggcctcgcatgctggacttcatagtgcc agtgtccctggtattctggctctggatctgtgtccctcagacaccaacaaagttctcacc ggtggagctgataagaacgtggtggtgtttgacaagaaggaggagcagattgtggcaaca cttaagggtcacaccaagaaggtcacctctgtcatttaccatccatcccagtccgtggtc ttctctgcgtctccagacaacaccatccgtgtgtggtccgtcaccggaggcaactgtatc caggtggtgcgtgcccacgatgcaggtgtcactggactctcccttcatgctactggggac tacctgctcagctcctctgaggatcagtactgggccttttctgatatccagactggtaga gtcctcaccaaagtcactgatgaaagtgctggctgtgctctcacctgtgctcaattccac cctgatggtctcatttttggcactgggacggccgattcccaaatcaagatctgggatctg aaggagcgtaccaacgtggccaacttcccaggccactctggccccgtcacctccattgct ttctctgagaatggatactatctggccacaggtgcccaggatagctctctgaaactgtgg gatctgaggaaactgaagaacttcaagaccatcaccctggacaacaactatgaggtgaag tccctcgtgtttgaccaaagtggtacctacctggctgtaggagggtctgacatccgtgtc tacatctgcaagcagtggtctgaggtcctcaacttcacagaccatacaggattggtgaca ggagtggcctttggagagaacgctcagttcctgacctctgcaggaatggacagaagcctc aaattttacagtttgtag

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