Siniperca chuatsi (mandarin fish): 122880369
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Entry
122880369 CDS
T08948
Symbol
cd74a
Name
(RefSeq) CD74 molecule, major histocompatibility complex, class II invariant chain a isoform X1
KO
K06505
CD74 antigen
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122880369 (cd74a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
schu04090
]
122880369 (cd74a)
00535 Proteoglycans [BR:
schu00535
]
122880369 (cd74a)
CD molecules [BR:
schu04090
]
Proteins
122880369 (cd74a)
Proteoglycans [BR:
schu00535
]
Cell surface proteoglycans
Others
122880369 (cd74a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC2-interact
Thyroglobulin_1
MHCassoc_trimer
Motif
Other DBs
NCBI-GeneID:
122880369
NCBI-ProteinID:
XP_044061346
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All DBs
Position
LG8:complement(17062669..17068086)
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AA seq
281 aa
AA seq
DB search
MADSAEDAPMARGSLAGSDEALILPAGPTGGSNSRALKVAGLTTLACLLLASQVFTAYMV
FGQKEQIHTLQKNSERMSKQLTRSSQAVAPMKMHMPMNSLPLLMDFTPNEDSKTPLTKLQ
DTAVVSVEKQLKDLMQDSQLPQFNKTFLANLQGLKQQMNESEWKSFESWMRYWLIFQMAQ
QKPVPPTADPASLIKTKCQMESAPGVSKIGSYKPQCDEQGRYKPMQCWHATGFCWCVDET
GAVIEGTTMRGRPDCQRRALAPRRMAFAPSLMQKTISIDDQ
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggccgactctgcagaagatgctcccatggccagaggtagtctggcaggcagtgatgaa
gcccttattctccctgcaggacccacagggggctccaacagtcgtgccttgaaggtggca
ggcctgaccaccctggcatgcctgctgctggccagccaggtcttcactgcctacatggtg
ttcggccagaaggagcaaatccacacgttgcagaagaactcagagagaatgagcaaacag
ctgacccgctcatcccaggctgtggctccaatgaagatgcacatgcccatgaacagcctg
cctctgctgatggacttcactccgaatgaggactccaagactcccttgactaaactgcag
gacactgctgttgtcagtgtggagaaacagttgaaggatctcatgcaggactcccagctg
ccgcaattcaacaagaccttcctcgccaacctgcagggcctgaagcagcagatgaatgag
agcgagtggaagagttttgagtcctggatgcgttactggctgatcttccagatggcccag
cagaagcctgtacccccaacggctgatccagcctctttgatcaagaccaaatgccagatg
gagtcagcacctggagtcagcaagatcggttcctacaagccccagtgtgacgagcagggc
cgctacaagcccatgcagtgctggcacgccactggcttctgctggtgtgtggacgagact
ggcgcagtcattgagggcaccaccatgcgcggccgccccgactgtcagaggagagcccta
gctcctcgtcgcatggcgtttgcacccagtctgatgcagaagaccatcagcattgatgat
cagtga
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