Siniperca chuatsi (mandarin fish): 122880410
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Entry
122880410 CDS
T08948
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122880410
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Protocadherins
122880410
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
PRIMA1
Motif
Other DBs
NCBI-GeneID:
122880410
NCBI-ProteinID:
XP_044061436
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Position
LG8:28354161..28377793
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AA seq
1014 aa
AA seq
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MIVLLIILCITDGVLSQIRYSVPEEADHGTLVGNIAEDLGLDLTKLASRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDREQICKQSASCQLNMEVFLENPLELFRVEIEVVDINDNPPNF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYTVSLSE
NALAGTLVIQLNATDLDEGLNGEIVYSFSNHISNRVKDLFSIDPRTGRIEVRGEVDFEES
SLYQIFVQAKDLGPNAVPAHCKVLVKVTDMNDNAPEITFSTVTESVREKAATGTVIALLS
VTDRDAEENGQIHVEILGDVPFKLKSSFRNYFTIVTDGPLNREQVDSYSVTVVARDKGTP
SLATSKSIRVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDPDIGHNALISYS
ILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVHARDAGTPELSSNATVKV
IIVDQNDNAPLVLGPLGKNGTAKEPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSAKRDPNQLYDLLIEVRDHGQPPLSSSASVLVMMVDSVAE
GRGGGDRGGTAKAKDGTLDLTLILIIALGSVSFIFLLVMIVLAVRCQKDKKLKIYTCLTS
DCCLACSSCCSRQGRARKKKLSKSDIMLVQSAGNVSGAGTAQVPVEESGSFGSHHQNQNY
CYQVCLTPESAKTDLMFLKPCSPSRSTDTDHNPCGAIVTGYTDQQPDIISNGSILSNETK
HQRGELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSSGADLFSN
CTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDSVPDTEVFESPEQTADKSFS
TFDKKTPLSHHHHLLKTHHLSHHQGSLERKELEAFLPSSKAPYNPAYLTRKRVC
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgcttttgattatcctgtgtatcacagatggagtgctctctcagatacgctac
tctgtgccggaggaggcggaccatggcactttggtggggaatatcgccgaggacctggga
ctggaccttaccaaactggcctcccgccgcttccaggtagtgcccagctctcggacaccg
tacctggaggtgaacctggagaacggcgtcttgttcgtcaacgaaaaaatcgaccgggag
cagatctgcaagcagagcgccagctgtcagctcaacatggaagtgttcttggagaaccca
ctggagctgtttagggtcgaaatcgaggtggtggacattaacgacaacccgccgaacttt
ccggagacagacatcacggtggagatctcagaaagcgccaccccgggcacccgtttcccc
ctggagagcgcgttcgacccggacgtgggctctaacgctttacgcacgtatgatatcacc
actaataactacttttacctggacgtgcagacccaaacggacggaaacaagttcgcggaa
ctggtcctggagaagccgctggaccgggagcagcaggcggcgcacaggtacgtcctgacc
gcggtggacggcggccagcctccccgtactggcaccgcgctgctggtggtcaaagtgctg
gactctaacgataacgtgccggtgtttgaccagcccgtctacacggtgagcctctcggag
aacgcactggctggcacgctggttatacagctgaatgccaccgacctggacgaggggtta
aacggagaaatagtttattccttcagtaaccacatatccaaccgcgtaaaggacctgttc
agcatagacccgcgtaccgggcgcatcgaggtgcgcggagaggtggatttcgaggagagc
agcctgtatcagatctttgtccaggccaaggatctggggccaaacgctgtgcccgcacat
tgcaaagtgctggtcaaagtcaccgacatgaacgacaatgcaccggagatcaccttcagc
actgtcactgagtcggtgagagaaaaggcggctaccggtaccgtaatcgcgctgctgagt
gtgacggaccgggacgcagaggagaacggacagatccacgtggaaatcctcggtgatgtc
ccgttcaaattaaaatcatcgtttaggaattatttcaccatagtgaccgacgggccgttg
aatcgggaacaggtggactcctactccgtcactgtggtcgcgcgggataaaggcacaccc
tcactcgccaccagtaagtccattagagtacaggtgtcagatgagaacgacaacgcgccc
acatttacgcagcctatatatgatgtgtatgtgacagagaataacgtgccaggggcgtac
atacatgctgtgacggctctggacccggacatcgggcataatgcgctcatcagctactca
attttagagtgtgacatccagggcatgtcagtcaaaacctatgtgtccatcaatgaggag
acaggatatctgtatgcactcaggtcctttgattatgagcagctgaaggatttcaccttt
atggtccatgcaagagacgcgggcaccccggagctctcctccaacgccacagtcaaagtc
atcatcgtggaccagaatgacaatgcccccctggtgctgggcccccttgggaagaatggc
acagccaaggagcccctgccccgctcagctgagcctggctacctagtgacccgcatcgtg
gctatggacgcggatgatggtgagaatgctcggctgtcctacagcatccagagggggaat
gagaatggcatgtttaggatggactggaggactggtgagctccggacagcgaggcgggtg
tcggccaagcgagaccccaaccagctgtacgacctgctgattgaggtgagagaccatggc
cagccgccgctgtcttccagcgccagcgtgctggtgatgatggtggacagcgtggctgaa
ggccggggcggcggcgaccggggaggcactgccaaggccaaagacggcactctcgacctc
accctcatcctcatcatcgccctgggctctgtctccttcatcttcctcctggtcatgatc
gtgctggccgtgcgctgccagaaggacaaaaagctcaaaatttacacctgcctgaccagt
gactgctgcctagcctgcagctcctgctgctcacggcagggccgggcccgcaagaaaaag
ctcagcaagtcggatatcatgctggtgcaaagcgccggtaacgtcagtggggccggtacg
gctcaagtccccgtggaggagtcaggaagcttcggctcccaccaccaaaaccagaactat
tgctaccaggtatgtctgactccagagtctgccaaaaccgacctcatgttcctaaagccg
tgtagtccgtctaggagcacagacaccgatcacaacccgtgcggggccatagtgacaggg
tacacagaccagcagcctgacatcatatcaaatggcagcattttatcaaacgagaccaaa
caccagcgaggtgaactcagctacctggttgacaggccgagacgtgtcaacagttcagca
ttccaggaggcagacctggtcagctccaaagacagcggccacggagacagtgagcagggt
gacagcgaccacgacgccaccaaccgaggccattcctccggcgctgatctgttctctaac
tgcacagaggagtgtaaggccctgggccactccgatcgctgctggatgccgagcttcgtg
ccctctgacgggcgccagggcccggactaccgcagcaacctccatgtacctggtatggac
tcagtcccggacacagaggtatttgaaagccccgagcaaacggctgataagtcattctcc
acctttgacaaaaagacacctctcagtcaccaccatcaccttctcaaaacccatcacctc
agccaccaccagggctccctagagagaaaagagttggaagcatttctgcctagctccaaa
gcaccttataacccagcttatttaacgaggaaaagggtttgctag
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