KEGG   Siniperca chuatsi (mandarin fish): 122880410
Entry
122880410         CDS       T08948                                 
Name
(RefSeq) protocadherin-10-like isoform X1
  KO
K16499  protocadherin delta 2
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:schu04515]
    122880410
Cell adhesion molecules [BR:schu04515]
 Cadherins
  Protocadherins
   122880410
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_3 PRIMA1
Other DBs
NCBI-GeneID: 122880410
NCBI-ProteinID: XP_044061436
LinkDB
Position
LG8:28354161..28377793
AA seq 1014 aa
MIVLLIILCITDGVLSQIRYSVPEEADHGTLVGNIAEDLGLDLTKLASRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDREQICKQSASCQLNMEVFLENPLELFRVEIEVVDINDNPPNF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYTVSLSE
NALAGTLVIQLNATDLDEGLNGEIVYSFSNHISNRVKDLFSIDPRTGRIEVRGEVDFEES
SLYQIFVQAKDLGPNAVPAHCKVLVKVTDMNDNAPEITFSTVTESVREKAATGTVIALLS
VTDRDAEENGQIHVEILGDVPFKLKSSFRNYFTIVTDGPLNREQVDSYSVTVVARDKGTP
SLATSKSIRVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDPDIGHNALISYS
ILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVHARDAGTPELSSNATVKV
IIVDQNDNAPLVLGPLGKNGTAKEPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSAKRDPNQLYDLLIEVRDHGQPPLSSSASVLVMMVDSVAE
GRGGGDRGGTAKAKDGTLDLTLILIIALGSVSFIFLLVMIVLAVRCQKDKKLKIYTCLTS
DCCLACSSCCSRQGRARKKKLSKSDIMLVQSAGNVSGAGTAQVPVEESGSFGSHHQNQNY
CYQVCLTPESAKTDLMFLKPCSPSRSTDTDHNPCGAIVTGYTDQQPDIISNGSILSNETK
HQRGELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSSGADLFSN
CTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDSVPDTEVFESPEQTADKSFS
TFDKKTPLSHHHHLLKTHHLSHHQGSLERKELEAFLPSSKAPYNPAYLTRKRVC
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgattgtgcttttgattatcctgtgtatcacagatggagtgctctctcagatacgctac
tctgtgccggaggaggcggaccatggcactttggtggggaatatcgccgaggacctggga
ctggaccttaccaaactggcctcccgccgcttccaggtagtgcccagctctcggacaccg
tacctggaggtgaacctggagaacggcgtcttgttcgtcaacgaaaaaatcgaccgggag
cagatctgcaagcagagcgccagctgtcagctcaacatggaagtgttcttggagaaccca
ctggagctgtttagggtcgaaatcgaggtggtggacattaacgacaacccgccgaacttt
ccggagacagacatcacggtggagatctcagaaagcgccaccccgggcacccgtttcccc
ctggagagcgcgttcgacccggacgtgggctctaacgctttacgcacgtatgatatcacc
actaataactacttttacctggacgtgcagacccaaacggacggaaacaagttcgcggaa
ctggtcctggagaagccgctggaccgggagcagcaggcggcgcacaggtacgtcctgacc
gcggtggacggcggccagcctccccgtactggcaccgcgctgctggtggtcaaagtgctg
gactctaacgataacgtgccggtgtttgaccagcccgtctacacggtgagcctctcggag
aacgcactggctggcacgctggttatacagctgaatgccaccgacctggacgaggggtta
aacggagaaatagtttattccttcagtaaccacatatccaaccgcgtaaaggacctgttc
agcatagacccgcgtaccgggcgcatcgaggtgcgcggagaggtggatttcgaggagagc
agcctgtatcagatctttgtccaggccaaggatctggggccaaacgctgtgcccgcacat
tgcaaagtgctggtcaaagtcaccgacatgaacgacaatgcaccggagatcaccttcagc
actgtcactgagtcggtgagagaaaaggcggctaccggtaccgtaatcgcgctgctgagt
gtgacggaccgggacgcagaggagaacggacagatccacgtggaaatcctcggtgatgtc
ccgttcaaattaaaatcatcgtttaggaattatttcaccatagtgaccgacgggccgttg
aatcgggaacaggtggactcctactccgtcactgtggtcgcgcgggataaaggcacaccc
tcactcgccaccagtaagtccattagagtacaggtgtcagatgagaacgacaacgcgccc
acatttacgcagcctatatatgatgtgtatgtgacagagaataacgtgccaggggcgtac
atacatgctgtgacggctctggacccggacatcgggcataatgcgctcatcagctactca
attttagagtgtgacatccagggcatgtcagtcaaaacctatgtgtccatcaatgaggag
acaggatatctgtatgcactcaggtcctttgattatgagcagctgaaggatttcaccttt
atggtccatgcaagagacgcgggcaccccggagctctcctccaacgccacagtcaaagtc
atcatcgtggaccagaatgacaatgcccccctggtgctgggcccccttgggaagaatggc
acagccaaggagcccctgccccgctcagctgagcctggctacctagtgacccgcatcgtg
gctatggacgcggatgatggtgagaatgctcggctgtcctacagcatccagagggggaat
gagaatggcatgtttaggatggactggaggactggtgagctccggacagcgaggcgggtg
tcggccaagcgagaccccaaccagctgtacgacctgctgattgaggtgagagaccatggc
cagccgccgctgtcttccagcgccagcgtgctggtgatgatggtggacagcgtggctgaa
ggccggggcggcggcgaccggggaggcactgccaaggccaaagacggcactctcgacctc
accctcatcctcatcatcgccctgggctctgtctccttcatcttcctcctggtcatgatc
gtgctggccgtgcgctgccagaaggacaaaaagctcaaaatttacacctgcctgaccagt
gactgctgcctagcctgcagctcctgctgctcacggcagggccgggcccgcaagaaaaag
ctcagcaagtcggatatcatgctggtgcaaagcgccggtaacgtcagtggggccggtacg
gctcaagtccccgtggaggagtcaggaagcttcggctcccaccaccaaaaccagaactat
tgctaccaggtatgtctgactccagagtctgccaaaaccgacctcatgttcctaaagccg
tgtagtccgtctaggagcacagacaccgatcacaacccgtgcggggccatagtgacaggg
tacacagaccagcagcctgacatcatatcaaatggcagcattttatcaaacgagaccaaa
caccagcgaggtgaactcagctacctggttgacaggccgagacgtgtcaacagttcagca
ttccaggaggcagacctggtcagctccaaagacagcggccacggagacagtgagcagggt
gacagcgaccacgacgccaccaaccgaggccattcctccggcgctgatctgttctctaac
tgcacagaggagtgtaaggccctgggccactccgatcgctgctggatgccgagcttcgtg
ccctctgacgggcgccagggcccggactaccgcagcaacctccatgtacctggtatggac
tcagtcccggacacagaggtatttgaaagccccgagcaaacggctgataagtcattctcc
acctttgacaaaaagacacctctcagtcaccaccatcaccttctcaaaacccatcacctc
agccaccaccagggctccctagagagaaaagagttggaagcatttctgcctagctccaaa
gcaccttataacccagcttatttaacgaggaaaagggtttgctag

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