Siniperca chuatsi (mandarin fish): 122880411
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Entry
122880411 CDS
T08948
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122880411 (chd9)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122880411 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
DEAD
HTH_CHD1_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
122880411
NCBI-ProteinID:
XP_044061443
LinkDB
All DBs
Position
LG1:26673773..26746122
Genome browser
AA seq
3012 aa
AA seq
DB search
MDFFNDPNLFVGGLEGLDEDGFPSAPSLVDELNLSADFEPLQVEPLGPVKHQDMMPPIST
QQAMPTYSEQMGHYIGSKAQNPMGQAFSGPGGTGGGGSRMIADQHGQYHNAAMSQVPQSN
GLFCNSSSPMWGNQNQNGNMYHPLSQQQQHQQQQLCHQQQQQLHNQQLHIRQQTHQQQHH
PCRHQQQEQQHRMRQQQLQQQQSHQQQLLNQRQHQQINTQTMSLQQQQHHNFSFHQGGQS
QSQQQVHHTQPQVQHQLTVGGARFHSRALPSKSYLDSQNASLSGTCLQPQQQQGSYQLTR
GGQAFSGSGPEDPNLPFPMHSSSMVHSMPTCSVSATAYQPAQYPAYPGEPEIPSLSQQSL
SSASVSRPATTTAPLTSTVPELSGTVCQFPSTAVMSQQHTRTPVNQAEECPFRALRCSGE
IQGNCKSSEMFGESMCCYPSMASQLPSEQPQSCGAINTNGYQALGDNLLPSEAQDGDLEG
LEPPDLLPDLLPQLEAALSQQDESNCSWADSSQERGYEHRKPPPVEYKEDKPRKNANGPG
SQVRVLSPPMKSSSSSSSSSSSSSSSSSSSSEKRAPRRTHHQMESNLLDKQEKANRIISE
AIAKARQRGEKNIPRVMSPESFPSSSSQYKTHRDRKHKGNGKSRPKEKACRKACIVPSSK
PRQKSKIGKIVIKIGKKKKLKPESSEESDDDPPPRHTSKDVDSKRRSNRQVKRKKYAEEL
EARLSDEEVKVIVKAKKSNTAASKQPAVQLFVENPSEEDAAVVDKIMSSRVVKKEVSPGV
VVEVEEFFVKYKNYSYLHCEWAAEQQLEKDKRIQQKIKRFKMKQAQRALFFADMEEEPFN
PDYVEVDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQA
AKPDSRRMERPPANLWKKREQSREYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGL
GKTIQSITFLEEIHRVGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQ
QYEMYFRDAQGRVMRGAYRFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKL
LEGFKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQK
LQGILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQAN
MPNLVNTMMELRKCCNHPYLIKGAEEKILEDFREVYSPTAIDFHLQAMVQSAGKLVLIDK
LLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPES
ERFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITR
NSYEREMFDRASLKLGLDKAVLQSMSGRDNSLGGGAGGGAAQQQLSKKEIEDLLRRGAYG
AIMDEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNF
WDKWAKKADIDMDMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGGSDSDDTKPKLR
RNPDRLNCYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRALLAYCLV
HYRGDDKIKSFMWDLIAPSEDGRTKELQNHLGLSAPVPRGRKGKKVKTQSSSFDIHKAEW
LRKHNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSEAQKVLDGVDSSEIKIW
VPDPDHSELPALWWDTISDKCLLLGVYKHGYEKYNTIRADPNLCFIERVGRPDEKAIAAE
QRGNDFMDGDVDDPEYKPAPALLKDDMEDDASSPGDLVVTDNAGDTVPLTEGETVYWPSS
SVLTARLRRLITASQRFTKSRQILHIHQSQSQSQSTMILSAPLCPLPPTLNDTLNPKMAA
KIERQQRWTRREEADFYRVVSTFGVVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAF
TAMCRRVCRLPPKEGDSEVDPSLTIQPITEERASRTLYRVELLRQVREQVLRHSLLFERL
SLCQMSSDLPVWWEAGTHDRDLLIGGAKHGVSRTDYHILRDPELSFMAAQRNYSQTKAAQ
QQSRTSTPLLHPQCQTTSSVMTGSPLPPPAQRDTELCGVVPKVEPASEGEEGREKQGESW
SPPGAPATPTGLDEKPVSETRDSERQMVAARTKPLTPNSSERKPKKASKRARREARRGSE
SDSDGSSSSSSSRSSSSSSSSSSSSSHSGSSSSSSSSSCTSGSSSSSSSSSSSSDDSESE
GQEGKKKVPAATSVKGFDEDSVASLSTTQDETQDTHAAENGITNNSSHSFQGGGYMLAAS
YWPKDRVIINRLDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLDNANSLCEDPSASP
QGSKVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESEEGPQAQQQYLARLHEL
QSASDTGLADITKPQCSFQSVPPDLTGQMRLNGLLDGQPVVKRRRGRRKNVEGMDLLFMN
KSRVPAVPDQVPPGWGGIGQVGMAVAPVPGFSQSSSQAPADTESRVPVINLKDGTRLAGD
DAPRRKDLEQWLKEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNS
LTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMF
DRILTGPIVPEEVSRRGRRPKNPLAKAAAAAAAAPNPAASTLGLNPLLANGLLSGMDLSS
LQAFQQNLQSLQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGLPNLLGMNSLLG
KPAQEGTGGTEEKAKGTTSGVTGEPSASKGPSHTSDTKGERTEGSNATPSSTSSAISPQS
ASAASAASSHPLSLNPLLLSGMLYPGMLLTPGLNLPVSATQLQSSDSDPTLPPAVSQSSS
QETERPAAEKDGEEDDEALEEALDEEEEEEEEESAEQKENSGPEGSGRAESSSSESGSSS
SSSDDSDSSDED
NT seq
9039 nt
NT seq
+upstream
nt +downstream
nt
atggatttctttaatgaccccaacctctttgttggaggtttggaggggctggacgaggat
ggcttcccctcagcaccatcacttgtggatgagctaaacctcagtgctgactttgagccc
ctccaagtggagcctctaggcccagtgaagcaccaagacatgatgccacccatttctacc
caacaagccatgcccacttacagtgagcagatgggtcactacattggcagtaaggcacag
aatcctatggggcaggcattttctggccctgggggtacaggtggtggaggcagtcgtatg
attgcagaccaacatggccagtaccacaatgctgccatgagtcaagtaccccaatccaat
gggctgttctgtaacagtagcagtccaatgtggggcaaccaaaaccagaatgggaatatg
tatcaccccttatctcaacagcagcaacatcagcaacaacagctttgtcatcagcagcag
caacaactgcacaaccagcaacttcacatcagacaacaaacacatcagcaacaacaccac
ccatgtcgtcatcaacaacaggagcagcagcacagaatgcggcagcagcagctgcaacaa
cagcaaagtcatcagcaacagctgttaaaccagcgccagcaccaacaaattaacacacag
actatgtccctgcagcaacagcagcatcacaatttctcctttcaccagggaggtcaatct
cagagccaacagcaagttcaccatactcagccgcaggttcagcaccaactaactgtagga
ggagcgaggttccattcaagggctctgccaagtaagtcttatttggatagtcaaaatgct
tctctgagtgggacttgcttacaaccacagcagcagcagggtagctaccagttgaccagg
ggaggtcaagccttctctggatcaggaccggaagaccctaacctgcctttccccatgcat
tcatcatctatggttcactccatgcccacgtgctcagtcagtgccactgcttaccaacca
gctcagtaccctgcctaccctggagagccagaaatacccagtctcagtcagcagtctttg
tcctcagcctcagtgtctagacccgccaccaccactgcacccctcacttctacagtgcct
gagctctcagggacagtatgtcagtttccatccacagcagttatgagtcagcagcacact
aggacgccagttaaccaggcagaggaatgtccttttcgggccctacgttgttctggagaa
atacagggaaactgcaagtcatcagagatgtttggtgaatctatgtgctgctatcccagc
atggccagccaactgccctctgagcagcctcagagctgcggggccatcaacactaatgga
taccaagcactgggagacaatctcctgccatcagaggctcaggatggagacttggagggc
ttggagcctcctgacctcctgcctgacctcctgccccagctggaggctgctctcagccaa
caggatgaatccaactgttcctgggccgattccagccaagagaggggatatgagcacagg
aaaccaccacctgttgagtacaaggaagataagcctcgaaagaacgctaatggtcccggt
agccaggtacgggtcctcagtcctccaatgaagagcagctcatcgtcctcctcctcttcc
tcatcgtcttcatcctcatccagctcctcatcggagaagagagcgccacggaggacacat
catcagatggagtcaaatctactggacaagcaggagaaggccaataggataatatcagag
gctattgctaaggcacggcagcgtggggagaagaacatccccagagttatgagccctgag
agcttccccagctcttcctcacagtacaagacgcaccgtgaccgcaagcacaaaggaaac
ggcaagtcacggcccaaagagaaggcctgtaggaaggcctgcattgtaccctcctccaag
cccaggcagaagtcaaagatcgggaaaattgtcatcaagattggaaagaagaaaaagcta
aagccagagtcttcagaggagtcggatgatgaccccccccctcgacacacttctaaagat
gtcgactctaagaggcgatctaatcgccaggtgaagagaaagaagtacgctgaagagctg
gaggccaggttgtcagatgaggaagttaaggttattgtcaaagccaagaaatccaacact
gcagcatccaagcagcctgctgttcaactctttgtagagaatcccagtgaagaggatgct
gctgttgttgacaaaatcatgtcctctcgtgtcgtcaagaaggaggtctctccaggagtg
gtggtcgaagtggaggagttttttgtaaaatacaaaaactactcctacctacactgtgag
tgggctgcagagcagcaactggagaaggacaagaggattcagcagaagatcaaacgtttt
aagatgaaacaagcacagagggcgctcttctttgcagatatggaagaggagccctttaac
cctgactatgtagaggtagacagagtgctggaggtgtcgtattgcgaggacaaagacacc
ggagaggaggtggtgtactacctggtgaagtggtgctctctgccttatgaggacagtacc
tgggagctaaaggatgacgtagatcagagtaagattgaagagtttgagcagctgcaggca
gccaagccagactcacgtaggatggagcggcccccggccaatctatggaagaagagggag
cagtcgagggaatacaggaatggcaacagcctcagggactaccagctagagggggtcaac
tggctcctcttcaactggtacaacagacgaaactgcatcctggcagacgagatgggcctg
ggaaagaccatccagtccatcacgttcctggaagagatccatcgtgtgggcattaaaggg
ccattcctcatcattgccccgctctccaccattgccaactgggagcgtgagttccgtact
tggacccatctcaatgtcatcgtctaccatggaagcatggtcagcaggcagatgctccaa
cagtatgagatgtatttcagggatgcacagggccgtgtgatgcgaggtgcgtacaggttc
caggctgttatcaccacatttgagatgatcctgggaggctgtcccgaactcaatgccata
gagtggcgctgtgttatcatcgatgaggcccaccgcctgaagaacaagaactgcaagttg
ctagagggtttcaagctcatgaacttggagcacaaggtcctgctgacaggtactcctctc
cagaacacagtggaggagctcttcagcctgctccacttcctggagccggcacgcttccct
tcagaaaacaccttcatgcaggagtttggagacctgaagactgaggagcaggtacagaaa
cttcagggtatcctgaagcccatgatgctgcgtcggttgaaggaggacgtggagaagaag
ttggcccctaaagaggaaaccatcatcgaggttgagctcaccaacattcaaaagaagtac
taccgtgccatcctagagaagaacttctctttcctggctaagggagctggccaggcaaat
atgcccaacctggtcaacaccatgatggagctgagaaagtgctgcaaccacccctacctc
atcaaaggggcagaagagaagatcctagaggacttcagggaggtgtatagccccactgcc
atcgactttcacctgcaggctatggtgcagtctgccgggaagctggtccttattgacaag
ctgctgcctaagatgaaggccggagggcataaggtgctcatcttctcccaaatggtgcgc
tgcctggacatcttggaagactacctcattcagagaaggtacttgtatgagcggatagat
ggacgcgttcgtgggaacctgcgtcaggcagctatcgaccgcttcagtaagccagaatcg
gaacgcttcgttttccttctatgtacaagagctggtggcctgggaatcaacctcacagca
gccgacacctgcatcatctttgactccgactggaacccgcagaacgacctgcaggcccag
gctcgctgccatcggattggtcagaacaaggcagtgaaggtgtaccgtctgatcaccagg
aattcatatgagcgagaaatgtttgatcgtgccagcctcaagctgggcctggacaaggca
gtgttgcagagcatgagtggccgagataacagcctgggaggaggtgccgggggaggggca
gcacagcagcagctgtctaagaaggagattgaggatctgttgcgacgtggtgcatacggg
gccatcatggatgaggaggatgaaggggccaaattctgtgaggaggacattgaccagatc
ctccagcgcaggacaaagaccatcaccattgagtctgagggacgagggtccacctttgct
aaggctagttttgtggcgtccggaaaccgcacagacatctctctggatgaccccaacttc
tgggacaaatgggccaaaaaggctgacattgatatggatatggtcaacggcagaaacagc
ttggtgattgacactcctcgtgtcagaaagcagacaaggccgtttagtgccaccaaggat
gagttggcagagctttcagagggcggcagcgacagtgacgacaccaaacctaagctcagg
cgaaaccccgaccgcctcaactgctatggacgcacagagtgcttcagagtagagaagaac
ctgcttgtttatgggtggggtcgttggaaggatattctcaaccatggccgttttaagaag
caactgactgagtgggatgtggagtccatctgcagggccctgctggcttactgcctggtc
cattaccgtggagatgacaaaattaaaagcttcatgtgggacctgatcgcccccagtgag
gacggacgcaccaaggagctgcagaatcacctgggtttgtctgccccagtccctcggggc
agaaagggtaagaaggtgaagacccagtccagctcttttgacatccacaaagctgagtgg
cttaggaaacataacccagagcacatgcttcaagacgatggctacaagaaacacctcaaa
caccactgcaacaaggtgctgctcagggtcagaatgctctactacctgaaacaagaggtg
ataggaagcgaagcccagaaggtgctagacggcgtggactccagtgagataaagatctgg
gtgccagaccctgatcattcggagctgccagccttgtggtgggataccatctctgacaag
tgtctgctgctgggtgtctataagcatggttatgagaagtacaacactattcgtgcagac
cctaacctgtgcttcatagagcgtgtgggacgaccagatgagaaggccatcgctgccgaa
cagagaggcaatgatttcatggatggggatgtggatgatccagagtacaagcctgctcca
gccctgctgaaggacgatatggaggatgacgcctcctcccctggagacttagttgtcact
gacaatgctggagatacagttccattgacagaaggtgaaactgtctactggccctcatcc
tcggtgctgacagccaggctgaggcgtctgatcacagcctctcagcgcttcaccaagagc
cggcagatcctccacatccaccagtctcagtctcagtcccagtcaaccatgatactgtct
gccccactctgcccgctgccccccacactcaacgacaccctcaaccccaagatggctgct
aagattgaacgccagcaaagatggaccaggcgagaagaggctgacttctaccgtgtggtc
tccacctttggtgttgtttttgacccaaatcttggccggttcgactggaccaagttcagg
gccatggctcggctgcacaagaagactgacgagagcctgcagaaatacctgtgtgctttt
accgccatgtgccgaagggtgtgtcgcctgccacccaaagagggagactctgaagtggac
ccgtctctgacgatccagcccatcacagaggagcgagcgtctcgtaccctgtacagagta
gagttgcttcgccaggtgagggaacaagtccttcggcattcgttactctttgagcggctg
tcgctgtgccagatgagctctgatttacccgtctggtgggaagctggtacccatgaccgt
gacctgctaattggtggtgccaagcacggcgtcagccgcacagattaccacatcctgaga
gaccctgagctcagcttcatggctgcccaacgcaactacagccaaacaaaagctgcacag
cagcaatcacgcacatccaccccgcttctacaccctcagtgccagaccaccagctcagtg
atgacaggctcgccactgcctccacccgcccagagagacacagagctctgtggggttgta
cccaaagtggaaccagcctcagagggggaggagggcagggagaagcagggggagagttgg
agccctcctggagcaccagctactcccacaggtctggacgagaagcctgtttctgagacg
agggacagtgagaggcagatggtggcggcacgaaccaaacctctcacacccaactcctct
gagaggaaacccaagaaggccagcaagagggcccgcagggaggctaggcgtggctcagag
tctgactcagatggctcctcctcaagctcttcatcgcgctcctcttcctcttcatcatca
tcctcttcttcctcgtcacattccgggtccagctcctcctcctcttcatcgtcttgcact
tctggctcttcgtcatcatcgtcctcctcctcatcttcttctgatgacagcgaaagtgag
ggacaggaagggaagaagaaagtgcctgcagcaacaagtgtaaagggctttgatgaggat
agtgtggcatctctgagcactacacaggatgaaacacaggacacccacgcggctgagaac
ggcatcaccaacaactcctcacattctttccagggaggagggtacatgctcgctgcatcc
tactggccaaaggatcgcgtgatcatcaaccgcctggacagcatctgccaggcagtgcta
aagggcaagtggccaggaacacgtcgggtctacgagcctggaggtgcagtggcctccttc
tacaccaccaagctgctggacaatgccaacagcctgtgcgaggacccctctgcctcacca
caggggtcaaaggtgaccaagcatgttgcagaaaacaaggagttctcagtaaaactgaac
gatcaggaaggaggtctgaagctaaccttccagaaacaaggtctacctctgaagaggccc
ctggagtcagaggagggcccccaggcccagcagcagtacctggcccggcttcatgagctg
caaagcgcctcagacacaggcctggctgacatcaccaagcctcagtgcagcttccagagt
gtgcctccagatcttaccggtcagatgaggctgaacggacttctggatggccagccagtg
gttaagaggcgaaggggaaggaggaagaacgtggaggggatggacctgctcttcatgaac
aagagtagagtccctgctgttcctgatcaggtgcctccagggtggggcggtattggccaa
gtgggcatggctgtggcccctgtgccgggcttcagccagagctccagtcaggcccccgcg
gacactgagagcagggtccctgttatcaacctcaaagatggcacccggcttgctggggac
gacgcccccaggaggaaagatctagaacagtggctaaaagagcaccctggttttgtggca
gacacgggagcctttattcctggggtaaataagatgcagatgcagttccacttccaggat
ggtcggcccaagcagaagaggcaccgctgcaggaaccccaacaagatcgatgtgaacagc
ctgacaggagaggaaagggtccagatcatcaacaggagaaatgcacgcaaggttggtgga
gcctttgctcctcctctgaaggatctgtgccggttccttcaggagaaccccgagtatgga
gtgccacctgaatgggctgatgttgtcaaacagtcgggttacctcccagagagtatgttt
gacaggatcctgacgggacccatcgttcctgaggaggtgagccggcgtggacgtcgacct
aagaaccctctggccaaggcggcggcggcagcagcagcagcacccaacccagcagcctcc
acccttggtctgaaccctctgctggccaacggcctcctctctggaatggacctgtccagc
ctgcaggccttccagcaaaacctccagagcttacagtccctgcagctcaccgcaggcctg
atggggctgccgtctgacgcgagcaacctggctgcaagtaacttagctgccatgtttccc
atgatgctgtctggtatggctggattgccaaacctgcttggcatgaacagcttgcttggg
aagcctgctcaggagggcaccggaggcaccgaggagaaggcaaagggaaccaccagcggt
gtaacaggagagccgtctgcctctaaaggcccatctcacacctcagacaccaaaggagaa
aggacagagggctcaaacgcgactccttcctccacttcctctgccatctccccacaaagt
gcttcagctgcctctgcagcctccagtcacccactgtctcttaatcccttgttactctcc
ggtatgctttacccagggatgcttctcactccaggccttaaccttcctgtgtctgccaca
cagctgcagagctcagacagtgaccccacccttcctcctgcagtctcccagtcatcgtcg
caggagacagagcggccagcggcagagaaggacggagaggaggatgacgaggctttagaa
gaggctttggacgaagaagaagaagaagaggaggaggagtcagcagaacaaaaagagaac
agtggccctgaaggttcggggagagccgagtcatcttcatcagagtctgggagctcttct
tcctcatcggatgattcagactccagtgatgaggactga
DBGET
integrated database retrieval system
