Siniperca chuatsi (mandarin fish): 122880417
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Entry
122880417 CDS
T08948
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122880417 (sox3)
Transcription factors [BR:
schu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122880417 (sox3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122880417
NCBI-ProteinID:
XP_044061452
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Position
LG8:complement(12567426..12569813)
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AA seq
299 aa
AA seq
DB search
MYMMETEIKTPLPQSNSGSAPGAKNNNVSDQERVKRPMNAFMVWSRGQRRKMAQENPKMH
NSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYSL
PGGLLAPGANAVNNSVSVGQRMDGYAHMNGWTNSAYSLMQDQLAYPQHHSMNSPQIQQMH
RYEMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTTSAMGLSSMASVCKTEPSSPPPAIT
SHSQRACLGDLRDMISMYLPPGGDSAEHSSLQSSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgatggaaaccgagatcaagaccccgctcccgcagtccaactcgggctcggcg
ccgggcgcaaagaacaacaatgtcagcgaccaggagcgggtgaagcggccgatgaacgcc
ttcatggtctggtcccggggacagcggaggaagatggcacaagaaaatcccaaaatgcac
aactctgaaatcagcaagcggctcggtgctgactggaaacttctgaccgacgctgaaaag
aggccattcatcgacgaggccaagcgtctacgcgctatgcacatgaaggagcatccggat
tataaataccgtccccgtaggaagaccaagaccttgctcaagaaagacaagtattctttg
cccgggggactgttggcgccaggggccaacgccgtcaacaactctgtgtcggtggggcag
cggatggacggttatgcgcacatgaacgggtggacaaacagtgcgtactccctcatgcag
gaccagttggcctaccctcagcatcacagcatgaatagcccccagattcagcagatgcac
cgatacgagatggcaggtctccagtacccgatgatgtcctcggcgcagacctacatgaac
gcggcttccacgtatagcatgtctccagcgtacacgcagcaaaccaccagcgccatggga
ctgagctccatggcgtccgtgtgcaagaccgagccgagctcaccacctccggccatcacg
tcccactctcagcgggcgtgtttgggggacctgagggatatgataagcatgtacctgcct
cccggcggggacagcgcagagcattcctccctgcagagcagccggttacacagcgtccat
ccgcactatcagaccgcagggactggcgtcaatgggacgctacctctcacccacatctga
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