Siniperca chuatsi (mandarin fish): 122880546
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Entry
122880546 CDS
T08948
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122880546 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
schu01007
]
122880546 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schu03016
]
122880546 (hars)
Enzymes [BR:
schu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
122880546 (hars)
Amino acid related enzymes [BR:
schu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
122880546 (hars)
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122880546 (hars)
Prokaryotic type
122880546 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
122880546
NCBI-ProteinID:
XP_044061732
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All DBs
Position
LG8:30415432..30439025
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AA seq
522 aa
AA seq
DB search
MNVLGMFCVRARSGLVGFRTATCAGSLHSFTGITAAQIDEEVAKLLELKAQLGGDDGKHQ
FVLKTAKGTRDYNPKQMAIREKVFNTIIGCFKRHGAETIDTPVFELKETLTGKYGEDSKL
IYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQ
CDFDIAGQYDAMIPDAECLKIVHEILSELDLGDFRIKVNDRRILDGMFAVCGVPDDQFRT
ICSTVDKLDKMPWEDVKKEMVNEKGLSEEAADQIGEYVSMQGGMDLAERLLQDQKMSQSK
QACAGLLDIKLLFSYLQLFQVTDKVVFDLSLARGLDYYTGVIYEGVLTQAGVAPVSTEAQ
NGAPAEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEASAEK
VRTTEVQVMVASAQKNLLEERIRLVTELWNAGIKAEVMYKKNPKLLSQLQHCEESGIPLV
AILGEQELKDGVVKLRVVATREEVDVSRADLIGEVRRRTSEA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgctgggcatgttttgtgttcgtgctcgttctggtctggtgggctttcggact
gcaacgtgtgccggatctctgcattctttcactgggatcactgcggctcagattgatgaa
gaggtagccaaactgctggagctgaaggcacagttaggaggagatgatggcaaacatcag
tttgtcctcaagacggcaaagggaacgagggactataaccccaagcagatggccatcaga
gagaaagtcttcaacaccatcatcggctgcttcaaacgccatggagcagagaccatcgac
acacctgtttttgaactaaaggaaacattgacagggaagtatggagaagactccaagctg
atctatgacctcaaagaccagggaggagagctgctgtccctcagatatgacctcactgtg
ccctttgcccgctacctggcgatgaacaagataaccaacatcaagcgctaccacatcgct
aaggtctaccgccgtgataacccagccatgacccgcggacgctacagagagttttatcaa
tgtgattttgacatagcagggcagtatgacgccatgattccagatgctgagtgtctgaag
atcgtccacgaaatcctgagtgagctggacctcggagacttccgtatcaaggtcaacgac
agacgcatcctcgatgggatgtttgctgtgtgtggtgttccagatgaccagttccgcaca
atctgttcgacagtggataaactggacaagatgccctgggaggacgtgaagaaggagatg
gtgaatgagaagggcttgtcggaggaggcagccgaccagatcggggagtacgtcagtatg
cagggtggaatggacttagcagagcgcctccttcaggaccagaaaatgtctcagagtaag
caggcctgcgctggcctgttggacataaagctgctcttcagctacctgcagctcttccag
gtcacagacaaggtggtgtttgacctcagtctggcccgtggtctggactattacacagga
gtcatttatgagggggttctgactcaggcaggtgtggccccggtgtccactgaagcccaa
aacggagcccctgcagaggagagtgtcagcgtgggcagcgtggccggcgggggtcgatat
gacggcctggtgggcatgtttgaccccaagggcaggaaagtgccgtgtgtgggtgtcagc
atcggtatcgagaggatcttctccatcatggagcagaaggctgaggcctcagcagagaag
gttcgtaccacagaggttcaggtcatggtggcgtctgctcagaagaacctgctggaggag
agaatcagactcgtcactgagctctggaatgctggcattaaggcagaggtgatgtataag
aagaaccccaaactgctgagtcagctgcagcactgtgaggagtctgggatccccctggtg
gccatactgggagaacaggagctgaaagatggagtggtcaaactccgcgtcgtggccacc
agagaggaggttgatgtttccagagcagatcttataggtgaggtcaggaggaggacctct
gaggcctag
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