Siniperca chuatsi (mandarin fish): 122880620
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Entry
122880620 CDS
T08948
Symbol
neil3
Name
(RefSeq) endonuclease 8-like 3 isoform X1
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122880620 (neil3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schu03400
]
122880620 (neil3)
Enzymes [BR:
schu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
122880620 (neil3)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122880620 (neil3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-GRF
H2TH
Fapy_DNA_glyco
zf-RanBP
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
122880620
NCBI-ProteinID:
XP_044061866
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Position
LG8:7228733..7238721
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AA seq
582 aa
AA seq
DB search
MVEGPGCTLNGEKIRSKVQKGQKLKEIRGSLTTSTKNNSEGNAFHSFYGSQFTGVETLGK
ELFMYFGPRALRVHFGMNGSMRINPAERKDRTGSIPVLEIHLTNDIVCFFDSTVEIRMTE
DCEQRVRAIESLDVCSSKFSFSRSEEAVRSQSSRMLSDVLLDQAVMPGVGNIIKNEALFD
SGLHPAMKVQQLTDEQIHHLVKMTRDFTLLFYKCRKSGSPLYKHYKVYKRPQCGQCFHVI
TVCRLGDNGRMTYFCERCQKGDPSGLDISKLPVRNSLIGWAYNERTNDNVAKKEEEDWAC
QLCTLINQSEAKACDACLTPRPEVHKEDISTEASAFTADLIKYPCTAFKKPQEELKVNWR
SAFGTSTLVFSDLSKKPKHVNSPLSPAGSHLNSLAAERGSYKYSVCQGTTSPNYASGGWQ
KQSAELSNGESLASYSHPSKKMRIDHSPFASNNAQNGTPNSRTHKIAATSRSSSISSSPS
APCCASHRRPAVLRVVNKEGENKGRQFYACSLPRETKCNFFEWADLHFPFCHHEKRCLMR
TVLKLGPNNGRNFYTCSFQKGKQCDFFQWAENGPVVSILPGC
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaggtccggggtgcacattaaacggagagaaaatccgttctaaagtccaaaaa
ggacagaaattgaaagagattagaggcagtttgacaacatccaccaagaacaactccgag
ggaaatgctttccacagtttttatggttctcagttcaccggcgttgaaacgctgggaaag
gagctctttatgtactttggtccaagagcgttgagagtccactttggtatgaatggatca
atgcgtataaaccctgctgagaggaaggataggacaggctccataccagtgcttgaaata
cacctgactaacgacattgtgtgcttctttgacagcactgtggaaataaggatgacagag
gactgtgagcaacgggtgagggctattgagagtctggatgtgtgctcctccaagttcagc
ttctcccgctctgaggaggcagtgaggagccaaagtagcaggatgctcagtgatgttcta
ctagaccaggccgtcatgccgggagtcggcaacatcattaaaaacgaagccctgtttgac
tcgggcctccacccagccatgaaggttcagcagctgacagacgagcagatccaccacttg
gtgaagatgacgcgtgatttcactcttctgttttataagtgtcgcaaatctggctctcct
ctctacaaacattacaaagtctacaagcgtccccagtgcggccagtgctttcatgtcatc
acagtctgtcgtcttggagacaacggcaggatgacttacttctgcgaacgctgtcagaag
ggagatcccagcgggcttgacatcagtaagctcccagtcagaaacagtctgattggctgg
gcctacaatgagagaaccaatgataatgtggctaagaaggaggaagaggactgggcctgt
caactctgcacactcatcaaccagtcagaagcaaaagcctgtgatgcctgcctcactcca
agacctgaggtccacaaagaagacatcagcactgaagcatcagccttcacagctgatttg
attaaatacccctgcactgcctttaagaagccacaagaggagctcaaagtcaactggagg
tctgcatttggaacttccacccttgttttctctgacttgagcaagaagccaaagcatgta
aactccccgctctccccagccggcagtcatttgaattccttggcggcagagcgaggttca
tataaatacagcgtctgccaagggacaacaagccccaattatgcctctggtggctggcag
aagcaaagtgctgagctctccaatggggaatcactggcctcctacagtcacccatccaag
aaaatgagaattgatcacagtccttttgccagtaacaatgctcaaaatggaacccccaac
tcacgtacgcacaaaatagcagcgacaagccgcagctcctccatttcttccagtcccagt
gccccttgttgtgcatcccatcgtcgtccagctgtcctcagagtggtcaacaaagagggg
gagaataagggacgacagttctacgcctgctcgctccccagagagaccaagtgtaacttc
ttcgagtgggctgacttgcacttccctttttgtcaccacgagaaacgctgtttaatgagg
acagttctgaaactaggaccaaacaatggccggaatttctacacctgcagctttcaaaag
ggtaaacagtgtgactttttccagtgggcagagaatggaccagtggtatccatcctccct
ggttgttaa
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