KEGG   Siniperca chuatsi (mandarin fish): 122880668
Entry
122880668         CDS       T08948                                 
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:schu04121]
    122880668 (rlim)
Enzymes [BR:schu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122880668 (rlim)
Ubiquitin system [BR:schu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122880668 (rlim)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING_16 zf-RING_4 zf-RING-like
Other DBs
NCBI-GeneID: 122880668
NCBI-ProteinID: XP_044061939
LinkDB
Position
LG8:18548411..18555627
AA seq 643 aa
MEGSDSLEQSGSDQPESQRRRQLDRLGREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEQQNNTPITESGEDPVEPPESSEDPPSGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPEQPPAPQGQEV
VANAEPQVPMETEVVEEPVVEELAVIVEPEPELEEVVSQEILGEPPSPPAALPVQPPLPS
SPRRGQRRARSRSPEPRRTRARTARSRSPLSLDQLDGLPNPRHAHSFQGPISATNAPPVP
QVEGSSRTRQHVLSRQSTADSDVPVSRAGIESVPETQNSGSQEGEVAGGEGGAAGRRPPT
IMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTY
VSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGVNTPAD
LTEALNNPDATPAAAAAADERPVAAGVRARTAETDMDEGLATGPPASGGRARPRPPISLE
EPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGN
KLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggaagggtccgacagtttagagcagagtggcagtgaccagccagagtcacagcgcaga
agacagctggaccgcctgggcagggaggaggccttctaccagtttgtcaacaatctcagt
gatgaggactatcgtctcatgagagacaacaatcttttgggaaccccaggagaggtaaca
gaggatgagctgtttagtagacttcagcaaatcaaagatggtccagaacagcagaataac
acccccattactgaaagtggagaagatccagttgaaccaccggaaagctctgaggatcct
cccagtggggatagtctcttggactggctgaacacagtgaggcgtacaggcaacacaact
agaactggtcatcgtggaaaccagtcttggcgggccgtaagccagaccaacccaaacagt
ggcgattttcgcttcagcttggaaattagtgtgaaccgcaacctggctgaacagcaggca
gctgctgaaggggagcaggagtctccagagcagcctccggctccacagggccaagaagta
gtggcaaatgctgaaccacaggtccccatggagacagaagtggtggaagaaccagttgta
gaagagttggctgtcatagtggaaccagagcctgaactggaagaggttgtttcacaagag
attttaggagaacctcccagcccacctgctgccctgccagtacaaccaccgcttccttct
tctccacgcagaggacaaaggagagcccgcagccgcagtccagaaccacgcaggactagg
gcccgtacagccaggagccgctcccctctcagcttggatcagctagatggtcttcctaat
ccacgtcatgctcacagctttcaaggccccatctctgccaccaatgctcctcctgtgcct
caagtagagggcagttctcggactcgacaacatgttctttccaggcaaagcactgctgac
agtgatgttccggtatctagggctggcatagaatctgtcccagagacccaaaactctgga
tctcaggaaggagaagttgctgggggggaagggggtgcagcagggcgtcgtccccctact
attatgcttgatttacaggtgcgtcgtgtgcgtccgggtgaatatcgccaacgagacagc
attgctagtcgcacccgctcacgctcccagaactcaaacaacacatttctttatgagagt
gagcgtggtggatttcgtaggactttctcacgctctgagcgtgctggtgtgaggacctat
gtcagcacaattcgcatccctatccgaagaatctctgatgcaggtttgggagaggcaacc
tcaatggctctccaatctatgattcggcagattatgactggttttggtgaacttggctac
ctcatggattcagactctgattcttcagattcaaaccgtggagtcaacacacctgcggat
ctgactgaagccctcaacaacccagatgctactcctgctgctgctgctgctgctgatgaa
cgacctgtggctgctggagtcagagcaaggacagctgagactgatatggatgagggcctt
gccactggtccacctgcgtctggtggcagggctagacctagaccacctattagcctagag
gagcccagctcactgcccttcctgcgacttgcccacttcttcctcctaaatgatgatgat
gaggaccagccccaagggctgaccaaagagcagattgacaacctctccatgcgcaacttt
ggtgagagtgatgcattgaagacttgcagtgtctgcataacagagtatgcagaaggtaac
aagctacgtaagctgccctgctctcatgagtaccatgtgcactgcattgatcgctggctg
tctgaaaactccacttgccccatctgccgcagggctgtcctggtatcggccaaccgagag
agtgtggtgtag

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