Siniperca chuatsi (mandarin fish): 122880668
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Entry
122880668 CDS
T08948
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122880668 (rlim)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122880668 (rlim)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122880668 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
122880668
NCBI-ProteinID:
XP_044061939
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All DBs
Position
LG8:18548411..18555627
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AA seq
643 aa
AA seq
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MEGSDSLEQSGSDQPESQRRRQLDRLGREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEQQNNTPITESGEDPVEPPESSEDPPSGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPEQPPAPQGQEV
VANAEPQVPMETEVVEEPVVEELAVIVEPEPELEEVVSQEILGEPPSPPAALPVQPPLPS
SPRRGQRRARSRSPEPRRTRARTARSRSPLSLDQLDGLPNPRHAHSFQGPISATNAPPVP
QVEGSSRTRQHVLSRQSTADSDVPVSRAGIESVPETQNSGSQEGEVAGGEGGAAGRRPPT
IMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTY
VSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGVNTPAD
LTEALNNPDATPAAAAAADERPVAAGVRARTAETDMDEGLATGPPASGGRARPRPPISLE
EPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGN
KLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtccgacagtttagagcagagtggcagtgaccagccagagtcacagcgcaga
agacagctggaccgcctgggcagggaggaggccttctaccagtttgtcaacaatctcagt
gatgaggactatcgtctcatgagagacaacaatcttttgggaaccccaggagaggtaaca
gaggatgagctgtttagtagacttcagcaaatcaaagatggtccagaacagcagaataac
acccccattactgaaagtggagaagatccagttgaaccaccggaaagctctgaggatcct
cccagtggggatagtctcttggactggctgaacacagtgaggcgtacaggcaacacaact
agaactggtcatcgtggaaaccagtcttggcgggccgtaagccagaccaacccaaacagt
ggcgattttcgcttcagcttggaaattagtgtgaaccgcaacctggctgaacagcaggca
gctgctgaaggggagcaggagtctccagagcagcctccggctccacagggccaagaagta
gtggcaaatgctgaaccacaggtccccatggagacagaagtggtggaagaaccagttgta
gaagagttggctgtcatagtggaaccagagcctgaactggaagaggttgtttcacaagag
attttaggagaacctcccagcccacctgctgccctgccagtacaaccaccgcttccttct
tctccacgcagaggacaaaggagagcccgcagccgcagtccagaaccacgcaggactagg
gcccgtacagccaggagccgctcccctctcagcttggatcagctagatggtcttcctaat
ccacgtcatgctcacagctttcaaggccccatctctgccaccaatgctcctcctgtgcct
caagtagagggcagttctcggactcgacaacatgttctttccaggcaaagcactgctgac
agtgatgttccggtatctagggctggcatagaatctgtcccagagacccaaaactctgga
tctcaggaaggagaagttgctgggggggaagggggtgcagcagggcgtcgtccccctact
attatgcttgatttacaggtgcgtcgtgtgcgtccgggtgaatatcgccaacgagacagc
attgctagtcgcacccgctcacgctcccagaactcaaacaacacatttctttatgagagt
gagcgtggtggatttcgtaggactttctcacgctctgagcgtgctggtgtgaggacctat
gtcagcacaattcgcatccctatccgaagaatctctgatgcaggtttgggagaggcaacc
tcaatggctctccaatctatgattcggcagattatgactggttttggtgaacttggctac
ctcatggattcagactctgattcttcagattcaaaccgtggagtcaacacacctgcggat
ctgactgaagccctcaacaacccagatgctactcctgctgctgctgctgctgctgatgaa
cgacctgtggctgctggagtcagagcaaggacagctgagactgatatggatgagggcctt
gccactggtccacctgcgtctggtggcagggctagacctagaccacctattagcctagag
gagcccagctcactgcccttcctgcgacttgcccacttcttcctcctaaatgatgatgat
gaggaccagccccaagggctgaccaaagagcagattgacaacctctccatgcgcaacttt
ggtgagagtgatgcattgaagacttgcagtgtctgcataacagagtatgcagaaggtaac
aagctacgtaagctgccctgctctcatgagtaccatgtgcactgcattgatcgctggctg
tctgaaaactccacttgccccatctgccgcagggctgtcctggtatcggccaaccgagag
agtgtggtgtag
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