KEGG   Siniperca chuatsi (mandarin fish): 122880825
Entry
122880825         CDS       T08948                                 
Name
(RefSeq) synaptopodin 2-like protein
  KO
K21112  synaptopodin
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu04530  Tight junction
Brite
KEGG Orthology (KO) [BR:schu00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    122880825
SSDB
Motif
Pfam: Calsarcin
Other DBs
NCBI-GeneID: 122880825
NCBI-ProteinID: XP_044062264
LinkDB
Position
LG8:20063675..20080670
AA seq 1184 aa
MEMEKGHMSIRREVSWSPGRLRKPLQATQNTPGTECNAPWEKTGFNKEQMSRKTNLTRSA
SLSEKELKEARVRSQIIAAQLTIPSNSSSRGVQLFNRRKQRVNAFTLESCGEGSREDRAE
NVKIDPSSNKLTWAERSSEEKDRDLNFKNSSTKPLLSPPGRVHSVGDIMEDSGKDFHKEE
DMEDSVIQERHFLPVKEEQEEEEEARDEIHEELEDKVKDEIPPGSNNTDPVLMGHTEGQA
EINGGHTGPVPLGKLLNGCHSTSGPERVSVPTSKQTSTIINRTARPFFSPLTVQSPEAVN
PVMDIPRPPTYATPPLPAFTAPQPVAFSAPPPPPSYPTPPLPAFTNQPMQTYYSSPPPMS
PIMSPSSPPPSQFPVSSVSQFSPMPHYGPPTAPKPSTFVPQPAGERKPITAIKTGILEEG
AARRSSRKSMFTFKEKPVVAPNPELLSLVQGVDERKKHGQRSVPELAPEEELLALGAEAS
NFLAKEEDRAEEARAPEWASCLKSSRTRPRAEHRPEQSLTNVSGKGAELFAKRQSRMEKY
VVEKQNSGQIRSPSPTMSLPPSWVYPSNMPGRVKAIAKNSDMSAQLSQNLNAQQAVKQKP
RQKAPAPEPIPEPPPLENGCSKIEMDLSRHQPYQLNSSLFIFNPAKDPISTLPRGAPQSK
NLMSTQSFSRQTSLPYNPPSHFSSQCMSPQLPLSPTRGGAEYAPNPTSGQPRISSPMSAF
SPERVSSPRSGVQAPRPTFSAKKAGIAPQTPKDSSPVETPSETPTPTRTPSLNRRISSPE
GPATGTCTPSLQNNRPSTNISSRSVTSPVSSPRGTRCQSPMASQNIRFSTATSRPSQTST
ATSPRSTPWGSRCQSPMVSQNTQSSSSSSIPAFRPSQTSTTTSPLSPPWGSRCQSPMVSQ
HTQSSTVTFLSTSRPSQTSTATSPCSPPWGSRCQSPMVSQNTQSSTFSSVPTSRPSQTST
TTSPWGSRCQSPMVSQNTSTVISISTSRPTQTYTTTSPVPPPLGSRSQSPALSQTSLSFP
ATKPLYTSSATSPLPPPKDSRCMSPIVNNLDSKANHRLLAKNIINAAKRKNSPSPGALSG
HSLPISPLGNSHHGYECHKPPISPFQSRALGAQSPTFTSPPPTPTQRICSPVRLYNTRSL
TDSDASVESEDSGLRSPGLHSYNTCPRGWGGSLRVKRSTVSTDL
NT seq 3555 nt   +upstreamnt  +downstreamnt
atggagatggagaagggacatatgtctatcaggagagaggtgagctggagtccaggaaga
ttgagaaaacctctccaggcaacgcaaaacacccctgggacagagtgcaatgcaccatgg
gagaagacaggattcaacaaagaacagatgagccggaaaacaaatttgaccaggagcgcc
agtttatcagagaaggagctaaaggaggctcgtgtcaggagtcagatcattgctgctcag
ctcaccatcccttccaactccagctccagaggcgtgcagctcttcaaccggcgaaagcag
agagtcaacgccttcacgctcgaaagctgtggagaggggtcacgggaggacagagctgag
aatgtaaaaatcgacccctcgtctaacaaactaacatgggcagagaggagcagtgaggaa
aaagatagagacctgaactttaagaatagctctaccaagccactcttgtcaccacctggg
agggtacattcagtaggtgatatcatggaggactcaggtaaggatttccacaaggaagaa
gacatggaggacagtgttatacaagagagacatttcctccctgtcaaggaagagcaggag
gaagaggaagaggcaagagatgaaattcacgaggagcttgaggacaaagtcaaggatgag
attccccctggaagtaataatactgatccagttctgatgggacatactgaagggcaagca
gagataaatgggggccacacagggccagttccccttggaaagcttcttaatggctgccac
agtacctctggacctgagagggtgtctgtacccacatccaagcagacaagcaccatcatc
aatcgaactgccaggccatttttctcgccgctgacagtgcagtctccagaggcagtcaac
cctgtcatggacattccccgtcctcctacttacgccactccccctctccctgctttcact
gctccccaacctgtggcattctcagctccacctccgcctccgtcatatcccacacctcct
ctaccggcctttacaaaccaacccatgcagacctactactctagtccacctccaatgtcc
cctatcatgtccccttcctcccctccaccatcccagttccctgtttcttctgtatctcag
ttctcacccatgccccattatggccctcccacagccccaaagccctccacctttgttcct
cagcctgctggagagaggaagccgataacagcaatcaaaacaggaatacttgaggagggc
gctgctagaagatcaagtaggaagtcaatgttcacattcaaagagaaaccagtggtagct
ccgaaccctgagctgctatctctggtgcaaggggtggatgaaaggaagaaacatggacaa
agatctgtgcctgagctggcacccgaggaagagttgctggcgctaggtgcagaggcctcc
aacttcctcgccaaggaagaggacagggcagaggaggcaagagctccagagtgggcttcc
tgcctcaagagctccaggaccagaccaagagcagagcacaggccagagcagtccctcacc
aatgtatcaggaaagggggctgagctgtttgccaagcgtcagtccaggatggagaaatac
gtcgttgagaaacaaaattctggacaaattaggtctccttctcccacgatgtctctgcct
ccatcttgggtgtacccatcaaacatgcctggcagggtcaaggccattgctaaaaattct
gacatgagcgctcagctttcacaaaacctaaatgcccaacaagcagtcaagcaaaaacca
aggcaaaaagctccagcaccagagccaattccagagccgcctcctttagaaaatggttgc
tccaagatagagatggacctgtcaaggcaccagccctaccagcttaactcctccctcttc
atctttaacccagccaaggaccccattagtaccctacccagaggagcaccacagtccaag
aacctgatgtctacacagtctttctctagacagacttctttaccttataaccccccttct
cacttcagtagccagtgtatgtctccacagctgcctctcagccccacaagaggaggagca
gaatatgcaccaaatccaacctctgggcagccaaggatcagctctcctatgtctgccttt
tctccagagcgagtgtcctctcctcgctcaggggtccaggcaccaaggcccacgttttct
gccaagaaggcagggattgcaccacagacaccaaaggactcctccccagttgaaaccccc
agtgagactcccacgccaaccaggacgcccagcctcaacagacgtatcagcagcccagag
ggccccgccactggaacctgtacccccagcctccaaaataatcgcccctccaccaacata
tccagccgctcagttacttcccctgtatcctctcccaggggtacaagatgccaatctcct
atggccagtcagaatatccgattttccactgcaacatccagaccctcccaaacatctaca
gccacctctccacgctctactccttggggttcaagatgtcagtccccaatggtgagccag
aatacccagtcttccagcagctcctccattcctgcttttagaccttcccaaacttctacg
actacttctcctctttctcctccttggggttcaagatgccagtccccaatggtgagccag
catacccaatcttccactgtcaccttcctgtccacatccagaccctcccaaacctccaca
gccacatccccatgctctcctccttggggatcaagatgccagtcccctatggtgagccag
aatacccagtcttccaccttttcctctgttcctacttccagaccttcccaaacttctaca
actacttctccttggggatcaagatgccagtccccaatggtaagccagaatacttccact
gtcatctccatttccacatccagaccaacccaaacatatacaaccacatctcctgtccct
cctcctttgggctcacgttcccagtctcctgcactctctcagaccagtttatccttcccc
gccactaagcctctgtacacatcctctgccacctctcctcttcccccacccaaagacagt
cgctgcatgtcccccattgttaataacctagactctaaagccaaccatcgcctcctggcc
aagaacatcatcaatgcagccaaacgtaaaaacagcccatccccgggagcactgagcggt
cacagcctccccatctcacctctgggaaattcccaccatggctacgaatgtcacaaaccg
cccatcagccctttccagtcacgggcattgggggcccagtcccctaccttcaccagccca
cctcctaccccaacgcagaggatctgctcccctgtgaggctctacaacactcgctctctc
accgactctgatgcctctgttgagtctgaagactcaggcctccgatcgcctggcctgcac
tcctacaacacctgtcctcgcggctggggcggtagcctgagggtgaagagaagcaccgtc
tccactgacctgtga

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