Siniperca chuatsi (mandarin fish): 122880825
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Entry
122880825 CDS
T08948
Name
(RefSeq) synaptopodin 2-like protein
KO
K21112
synaptopodin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122880825
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
122880825
NCBI-ProteinID:
XP_044062264
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Position
LG8:20063675..20080670
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AA seq
1184 aa
AA seq
DB search
MEMEKGHMSIRREVSWSPGRLRKPLQATQNTPGTECNAPWEKTGFNKEQMSRKTNLTRSA
SLSEKELKEARVRSQIIAAQLTIPSNSSSRGVQLFNRRKQRVNAFTLESCGEGSREDRAE
NVKIDPSSNKLTWAERSSEEKDRDLNFKNSSTKPLLSPPGRVHSVGDIMEDSGKDFHKEE
DMEDSVIQERHFLPVKEEQEEEEEARDEIHEELEDKVKDEIPPGSNNTDPVLMGHTEGQA
EINGGHTGPVPLGKLLNGCHSTSGPERVSVPTSKQTSTIINRTARPFFSPLTVQSPEAVN
PVMDIPRPPTYATPPLPAFTAPQPVAFSAPPPPPSYPTPPLPAFTNQPMQTYYSSPPPMS
PIMSPSSPPPSQFPVSSVSQFSPMPHYGPPTAPKPSTFVPQPAGERKPITAIKTGILEEG
AARRSSRKSMFTFKEKPVVAPNPELLSLVQGVDERKKHGQRSVPELAPEEELLALGAEAS
NFLAKEEDRAEEARAPEWASCLKSSRTRPRAEHRPEQSLTNVSGKGAELFAKRQSRMEKY
VVEKQNSGQIRSPSPTMSLPPSWVYPSNMPGRVKAIAKNSDMSAQLSQNLNAQQAVKQKP
RQKAPAPEPIPEPPPLENGCSKIEMDLSRHQPYQLNSSLFIFNPAKDPISTLPRGAPQSK
NLMSTQSFSRQTSLPYNPPSHFSSQCMSPQLPLSPTRGGAEYAPNPTSGQPRISSPMSAF
SPERVSSPRSGVQAPRPTFSAKKAGIAPQTPKDSSPVETPSETPTPTRTPSLNRRISSPE
GPATGTCTPSLQNNRPSTNISSRSVTSPVSSPRGTRCQSPMASQNIRFSTATSRPSQTST
ATSPRSTPWGSRCQSPMVSQNTQSSSSSSIPAFRPSQTSTTTSPLSPPWGSRCQSPMVSQ
HTQSSTVTFLSTSRPSQTSTATSPCSPPWGSRCQSPMVSQNTQSSTFSSVPTSRPSQTST
TTSPWGSRCQSPMVSQNTSTVISISTSRPTQTYTTTSPVPPPLGSRSQSPALSQTSLSFP
ATKPLYTSSATSPLPPPKDSRCMSPIVNNLDSKANHRLLAKNIINAAKRKNSPSPGALSG
HSLPISPLGNSHHGYECHKPPISPFQSRALGAQSPTFTSPPPTPTQRICSPVRLYNTRSL
TDSDASVESEDSGLRSPGLHSYNTCPRGWGGSLRVKRSTVSTDL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagaagggacatatgtctatcaggagagaggtgagctggagtccaggaaga
ttgagaaaacctctccaggcaacgcaaaacacccctgggacagagtgcaatgcaccatgg
gagaagacaggattcaacaaagaacagatgagccggaaaacaaatttgaccaggagcgcc
agtttatcagagaaggagctaaaggaggctcgtgtcaggagtcagatcattgctgctcag
ctcaccatcccttccaactccagctccagaggcgtgcagctcttcaaccggcgaaagcag
agagtcaacgccttcacgctcgaaagctgtggagaggggtcacgggaggacagagctgag
aatgtaaaaatcgacccctcgtctaacaaactaacatgggcagagaggagcagtgaggaa
aaagatagagacctgaactttaagaatagctctaccaagccactcttgtcaccacctggg
agggtacattcagtaggtgatatcatggaggactcaggtaaggatttccacaaggaagaa
gacatggaggacagtgttatacaagagagacatttcctccctgtcaaggaagagcaggag
gaagaggaagaggcaagagatgaaattcacgaggagcttgaggacaaagtcaaggatgag
attccccctggaagtaataatactgatccagttctgatgggacatactgaagggcaagca
gagataaatgggggccacacagggccagttccccttggaaagcttcttaatggctgccac
agtacctctggacctgagagggtgtctgtacccacatccaagcagacaagcaccatcatc
aatcgaactgccaggccatttttctcgccgctgacagtgcagtctccagaggcagtcaac
cctgtcatggacattccccgtcctcctacttacgccactccccctctccctgctttcact
gctccccaacctgtggcattctcagctccacctccgcctccgtcatatcccacacctcct
ctaccggcctttacaaaccaacccatgcagacctactactctagtccacctccaatgtcc
cctatcatgtccccttcctcccctccaccatcccagttccctgtttcttctgtatctcag
ttctcacccatgccccattatggccctcccacagccccaaagccctccacctttgttcct
cagcctgctggagagaggaagccgataacagcaatcaaaacaggaatacttgaggagggc
gctgctagaagatcaagtaggaagtcaatgttcacattcaaagagaaaccagtggtagct
ccgaaccctgagctgctatctctggtgcaaggggtggatgaaaggaagaaacatggacaa
agatctgtgcctgagctggcacccgaggaagagttgctggcgctaggtgcagaggcctcc
aacttcctcgccaaggaagaggacagggcagaggaggcaagagctccagagtgggcttcc
tgcctcaagagctccaggaccagaccaagagcagagcacaggccagagcagtccctcacc
aatgtatcaggaaagggggctgagctgtttgccaagcgtcagtccaggatggagaaatac
gtcgttgagaaacaaaattctggacaaattaggtctccttctcccacgatgtctctgcct
ccatcttgggtgtacccatcaaacatgcctggcagggtcaaggccattgctaaaaattct
gacatgagcgctcagctttcacaaaacctaaatgcccaacaagcagtcaagcaaaaacca
aggcaaaaagctccagcaccagagccaattccagagccgcctcctttagaaaatggttgc
tccaagatagagatggacctgtcaaggcaccagccctaccagcttaactcctccctcttc
atctttaacccagccaaggaccccattagtaccctacccagaggagcaccacagtccaag
aacctgatgtctacacagtctttctctagacagacttctttaccttataaccccccttct
cacttcagtagccagtgtatgtctccacagctgcctctcagccccacaagaggaggagca
gaatatgcaccaaatccaacctctgggcagccaaggatcagctctcctatgtctgccttt
tctccagagcgagtgtcctctcctcgctcaggggtccaggcaccaaggcccacgttttct
gccaagaaggcagggattgcaccacagacaccaaaggactcctccccagttgaaaccccc
agtgagactcccacgccaaccaggacgcccagcctcaacagacgtatcagcagcccagag
ggccccgccactggaacctgtacccccagcctccaaaataatcgcccctccaccaacata
tccagccgctcagttacttcccctgtatcctctcccaggggtacaagatgccaatctcct
atggccagtcagaatatccgattttccactgcaacatccagaccctcccaaacatctaca
gccacctctccacgctctactccttggggttcaagatgtcagtccccaatggtgagccag
aatacccagtcttccagcagctcctccattcctgcttttagaccttcccaaacttctacg
actacttctcctctttctcctccttggggttcaagatgccagtccccaatggtgagccag
catacccaatcttccactgtcaccttcctgtccacatccagaccctcccaaacctccaca
gccacatccccatgctctcctccttggggatcaagatgccagtcccctatggtgagccag
aatacccagtcttccaccttttcctctgttcctacttccagaccttcccaaacttctaca
actacttctccttggggatcaagatgccagtccccaatggtaagccagaatacttccact
gtcatctccatttccacatccagaccaacccaaacatatacaaccacatctcctgtccct
cctcctttgggctcacgttcccagtctcctgcactctctcagaccagtttatccttcccc
gccactaagcctctgtacacatcctctgccacctctcctcttcccccacccaaagacagt
cgctgcatgtcccccattgttaataacctagactctaaagccaaccatcgcctcctggcc
aagaacatcatcaatgcagccaaacgtaaaaacagcccatccccgggagcactgagcggt
cacagcctccccatctcacctctgggaaattcccaccatggctacgaatgtcacaaaccg
cccatcagccctttccagtcacgggcattgggggcccagtcccctaccttcaccagccca
cctcctaccccaacgcagaggatctgctcccctgtgaggctctacaacactcgctctctc
accgactctgatgcctctgttgagtctgaagactcaggcctccgatcgcctggcctgcac
tcctacaacacctgtcctcgcggctggggcggtagcctgagggtgaagagaagcaccgtc
tccactgacctgtga
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