Siniperca chuatsi (mandarin fish): 122880864
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Entry
122880864 CDS
T08948
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122880864
04082 Neuroactive ligand signaling
122880864
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122880864
Ion channels [BR:
schu04040
]
Ligand-gated channels
GABA-A
122880864
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122880864
NCBI-ProteinID:
XP_044062344
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All DBs
Position
LG8:complement(20972656..20979066)
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AA seq
450 aa
AA seq
DB search
MSVRLHALLTLCLAFTQGGCMYPNHHWGEWNDSQLLPTIQKLMKGYNRYLRPNFNEGPVE
IGMSLDIASIDAISEINMDYTATIFLRQRWRDSRLVFPGNESVSVDGRLVSLLWIPDTFI
PDSKRSFLHDVTVENRLIRIFSNGTVLYALRITATIACNMDLTKYPMDRQVCTLQLESWG
YNLQDVVFYWTRGNDSVKGLDTLRLAQYSVESYYTSVSEAVYETGQYPKLVLHFALRRNV
LFFILETYVPSVLLVVLSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFTFIFGALLEYACAHFYTMQHQTIEDFHRDLLREFNESNGNGSIPIVSS
TQPNQSVEIASTAEEPTEQSENSDTRNNAGSKEKTPGQGCGLSSVKDASRRAASVFHVEN
PHNIDRHARTVFPTAFLFVNILYWLYYLFL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccggctgcacgcgctactgaccctctgcctggccttcacacagggtggttgt
atgtatcccaaccaccactggggggaatggaacgactctcagcttctgccaacaattcag
aagctgatgaaaggatacaaccgctacctcagacctaatttcaatgagggccccgtggaa
attggaatgagtcttgatatcgccagcattgatgccatctccgaaatcaatatggactac
actgcaactatcttcctccgtcagcggtggcgtgattcccgcctggtgttcccaggaaat
gagagcgtgagcgtggacggacgccttgtgtcactgctctggatccctgacaccttcatc
cccgactccaagcgctccttcctgcatgacgtcacggtggaaaaccgcctcatccgcatc
ttcagcaatggaactgttctctacgccctgcgcatcacagctacgattgcctgcaacatg
gacctgaccaagtaccccatggacagacaggtgtgcaccctgcagctggagagctggggc
tacaacctgcaggatgtggtgttctactggaccagagggaatgactcagtgaagggtctt
gacacactgcggctggctcagtacagtgtagagagctactatacgtcagtgtcagaggct
gtgtatgagacaggacaataccccaagctggtgttgcattttgcactgcgtagaaacgtg
ttgttctttatcttggagacatatgttccctctgttctgctggtggttctctcctgggtc
tctttctggatcagccagtcctctgtcccagctaggacctgtattggcgtcacaacagtc
ctgacaatgaccacactgatgatgggcgcccgcacttccctgcccaacgccaactgcttc
atcaaggccatagacgtttacctgggaatctgcttcaccttcatctttggtgcactgctg
gagtacgcttgtgcccacttctacaccatgcagcaccagaccatagaggattttcacagg
gatctcctgagggagttcaatgaatccaatggaaacggctccatccccatcgtcagctcc
acccaaccaaaccagtctgtggagatcgcctccactgcagaggagcccacagagcagtca
gagaacagtgacacaaggaacaatgccggatcaaaagagaagacgccgggacagggctgt
ggcctgtcttcagtgaaggatgcgtcgcgcagggcagcatctgtcttccatgtggaaaat
ccacacaacattgatcgccacgctcgcactgttttccccacggcgttcctctttgtcaat
atcctctactggctttactacctctttctctga
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