Siniperca chuatsi (mandarin fish): 122880872
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Entry
122880872 CDS
T08948
Symbol
gria1a
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor 1a
KO
K05197
glutamate receptor 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122880872 (gria1a)
04082 Neuroactive ligand signaling
122880872 (gria1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122880872 (gria1a)
Ion channels [BR:
schu04040
]
Ligand-gated channels
Glutamate (ionotropic)
122880872 (gria1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
122880872
NCBI-ProteinID:
XP_044062351
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Position
LG8:21121869..21192420
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AA seq
969 aa
AA seq
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MQRSFTILYTSLLGMCLGSSSSFPSNINIGGLFPIESHEYEVFRFALSHHQDIPKLVPQV
DMVKMGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHVCFVTPSFPIETAN
QFVIQLRPELQDALVGVIDHYGWTKFVYMYSSDSGLSVLQKVLDTAAERNWLVTSVNVET
MTEASFLKVFQDLDKRKEGQIIIDCETERLTGILKKIVEQGKNAKSYHYILANLGFLDID
LTDLRKGGANITGFQLVNNSEPSVSRVVQQWMEFDNKDSKVSKSGLKYTGALTYDGVKVM
STAFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIDGLTGHIQFNEKGR
RTNYTVSVMELAPSGPKKVGYWNEDEKYVTTASFMRGSNETYGLQNRTYIVTTILESPYV
MQKKNHEQLVGNDKYEGYIVELAAEIAKHVGYQYKLKIVSDGKYGARDPETKMWNGMVGE
LVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHAEDYEEGGEPQTPTQASASNGVQQGQTPTQQNTN
QQSLDQTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLA
AFLTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFRRSKIAVFEKMWSYMKAADPSV
FVKTTDEGVMRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSP
LRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIG
GLGLAMLVALVEFCYKSRTESHRMKQSINDAMRCSTLTRMSGNGAAERTDESSPTTXPKT
VQTLPCMSHTASMGLGASGCDHHVTVLAARNRQGGAEEEHKTLMTSKIMAVRFDPSILLA
VNMPDLNKT
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagcttcaccatcctctacaccagtttactggggatgtgcttgggttcaagc
tcaagttttccaagtaacatcaatataggaggattgttcccaatcgaatcgcacgaatat
gaggtttttcgtttcgccctctctcaccaccaggacatccccaaactggtgccgcaggtg
gatatggtcaagatggggaatagcttctccatgacatatgccttttgttcccagttctcc
aaaggtgtgtatgccatcattggcctgtatgacaggaagacagtcaacatgctcatgtcc
ttctgcggagcgctgcatgtctgcttcgtcacgccgtccttccccatcgagacagccaac
cagtttgtcatccagctgaggcctgagctccaggacgctctggtgggagtgattgaccac
tacggatggaccaagtttgtctacatgtacagttctgactcaggcctgtcggtgctgcag
aaggttctggacacagcagcggagaggaactggctggtgacctcggtgaatgtggagacc
atgacggaggcctccttcttgaaagtgttccaggatttagacaagaggaaggagggccag
attatcatcgattgtgagactgagaggctcactggcatccttaaaaagattgttgaacaa
ggcaagaatgcaaagagctaccactacatcctggctaacctgggtttcctggacattgat
ctgacagacctgaggaaaggtggggcgaacatcaccggcttccagctcgtcaacaactct
gagcccagtgtcagccgtgtcgttcagcagtggatggagtttgacaacaaagactccaaa
gtgtccaagagtggactcaaatacacaggtgctctaacatatgacggggtgaaagtcatg
tccacggccttccagaatttaaggagacagaggatagacatctctcgcaggggcaacgct
ggagagtgtcttgccaacccaccagctccctggggacagggcatagacatccagagagcc
ttgcagcaggtccgcatagatggattgactggtcacattcagttcaatgagaaaggccgc
agaaccaactacactgttagcgtcatggaactggccccctctggacccaagaaggttggc
tactggaatgaagatgaaaagtatgtgactaccgccagcttcatgaggggcagcaacgag
acttacggcctgcagaacagaacatacatagtcaccactatcttggagtctccatatgtg
atgcaaaagaaaaaccatgagcagcttgtgggaaatgacaagtacgagggctacattgtt
gagctggctgcagagatagccaaacatgtgggctaccagtacaaactgaagattgtttcc
gatggcaaatatggagccagagatcctgaaaccaagatgtggaatggcatggtgggagaa
ctggtatatgggaaagcagatgtggctgtggcacctctgaccatcaccctggtccgtgaa
gaagtgatcgacttttccaagcccttcatgtccctgggtatctccattatgatcaagaaa
cccaccaaatccaaacctggcgtgttttcattcctggacccgctggcttacgagatctgg
atgtgcattgtgtttgcctacattggcgtcagtgtcgtcctgttccttgtcagtcgattc
agcccatatgagtggcacgcggaggactacgaggagggaggtgaacctcagactcccacc
caagcatcagcctccaacggggtgcagcagggccagacaccaacgcagcagaacaccaac
cagcagagtcttgatcagaccaatgagttcggcatcttcaactccctttggttctcactg
ggggccttcatgcagcagggctgtgatatctcaccacgctctctgtctggccgcattgtt
ggaggcgtctggtggttcttcaccctcatcatcatctcatcctatactgccaacttggct
gccttcctgacagtggagaggatggtgtctcctatagagagtgctgaggatttggctaag
cagacagaaatcgcctatggaacgctggatgccggctccaccaaagaattcttcaggagg
tctaagatcgctgtgtttgagaagatgtggtcctacatgaaggcggctgacccgtccgtg
tttgtcaagaccacagacgagggcgtaatgagagtcaggaagtccaagggcaagtatgcc
tacctgttggagtccacaatgaacgagtatatagagcaaaggaaaccgtgtgacactatg
aaggtgggaggaaacctggactctaaaggttatggcatcgccacacccaagggctcccct
ctcagaaacccagtaaacctggcagtgttaaaactgaacgagcagggcctcttggacaaa
ttgaaaaacaagtggtggtacgacaagggagagtgcggcagcgggggcggggactccaag
gacaagacgagcgctctgagcctcagcaatgtggcgggagtcttctacatcctgatcggc
ggcctgggcctggccatgctggtggcactggtggagttctgctacaagtccaggaccgag
tcgcaccgaatgaagcaatccataaacgacgccatgcgctgctccaccctgaccaggatg
agtggcaatggagcggcggagagaacggacgaatcctcacccacgactntccccaagact
gttcagacgctgccctgtatgagccacaccgccagcatgggactgggtgcctccggctgt
gatcatcacgtcactgtgctggcggcgaggaataggcagggtggggcagaagaagagcac
aagactctaatgacctcaaaaatcatggctgtccggtttgacccatctattctcctggct
gtcaacatgcccgacttgaacaagacttaa
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