KEGG   Siniperca chuatsi (mandarin fish): 122881082
Entry
122881082         CDS       T08948                                 
Name
(RefSeq) WD repeat-containing protein 88-like isoform X1
  KO
K24757  WD repeat-containing protein 88
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:schu04990]
    122881082
Domain-containing proteins not elsewhere classified [BR:schu04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   122881082
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_EML Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_NWD2_C WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st PEP5_VPS11_N WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_DCAF4 RMC1_N zf-dskA_traR Ge1_WD40 PQQ_2 Nucleoporin_N Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_IFT122_1st XPA_N Beta-prop_Nup120_160 VPS8_N Beta-prop_NUP159_NUP214 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 122881082
NCBI-ProteinID: XP_044062728
LinkDB
Position
LG1:1097467..1106719
AA seq 403 aa
MASKNIDPLSVEEPPGGEEEEEEEEEEERGAGEWSRETEVPVKALRAHSAAVTAARLCFS
DSRVLSCSSDRTAILWDVESCRPLRVFDGLHSKTITECALMPNSNRMVTVSWDKNMVASD
LETGQTLWRCRQAGLLTSCSASSDGRLLVCAADPQNGVYISDAASGRTLHHVSDHHRSTI
TRCRFDPQSQRVATVSADRSIRLWDLLAQKTTVSIDSNHGNVVSDCCFTNNGHFLCTASW
DKSLKLWDLQAGGFRSHGGTTLQRGHEGSVSSCSFSADANLLASGSYDRTVALWDMSSVC
QALILKGHSHWVTDVSVSADRKLVASASKDRTVRLWNIENMEDIPEVMEKRRTEGTGIHI
LKCEECGKPFPVSRLQTSELLTQCVFCRLKSPSRYRPQPPPLM
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggcgtcgaaaaacatcgaccctttatcagtcgaggagcctccaggaggagaagaggag
gaggaggaggaggaggaggaggagagaggagccggagagtggagccgggagaccgaggtt
ccggtgaaggccttacgagctcacagcgccgccgtcaccgccgctcgactctgcttcagc
gacagccgcgtcctcagctgctcctccgaccgcaccgccatcctctgggatgtggagagc
tgcagacctctgagggtgtttgatggacttcatagtaaaaccatcactgagtgcgctctg
atgccaaacagcaacaggatggtgaccgtctcctgggataagaacatggtggcctcggac
ctggagacgggacagacgctgtggaggtgcaggcaggccggcctgctgacctcctgcagc
gcctcgtctgacggccggctgctcgtctgtgctgcggatccacagaacggcgtttacatc
agcgacgcggccagcgggcggacgctgcaccacgtcagcgatcaccaccgctccaccatc
acgcggtgtcggttcgaccctcagagccagcgggtggccacggtgtctgcagaccggagc
atcagactctgggacctgctggctcagaaaaccaccgtgtccatcgacagtaaccacggc
aacgtcgtctctgactgctgcttcaccaacaacgggcacttcctgtgcacggcatcgtgg
gataaaagcttgaagctgtgggacctgcaggcgggagggtttcgatctcacggcgggacg
acgctgcagagaggccacgaaggcagcgtgagctcctgcagcttctccgctgacgcaaac
ctgctggcgtctggctcctacgacaggactgttgcactctgggatatgtcctccgtctgc
caggctctcatcctgaagggccacagtcattgggtgacagacgtgtcagtcagtgctgac
aggaagttggtggcctctgcctccaaggacaggacggtcaggttatggaacatagagaac
atggaggacatcccagaggtcatggagaagaggaggaccgaaggaacaggaattcacatc
ctcaagtgtgaggagtgtggaaagccgttccctgtgtccagactgcagacctcagagctg
ctgactcagtgcgtcttctgtcgactcaaatcgccctccaggtaccggccgcagcctccg
cccctcatgtag

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