Siniperca chuatsi (mandarin fish): 122881132
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Entry
122881132 CDS
T08948
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122881132 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122881132 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122881132 (taf2)
03036 Chromosome and associated proteins [BR:
schu03036
]
122881132 (taf2)
Peptidases and inhibitors [BR:
schu01002
]
Metallo peptidases
Family M1
122881132 (taf2)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122881132 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
122881132 (taf2)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122881132 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
Peptidase_M1_N
IL2
SR-25
Motif
Other DBs
NCBI-GeneID:
122881132
NCBI-ProteinID:
XP_044062857
LinkDB
All DBs
Position
LG9:27155205..27185648
Genome browser
AA seq
1211 aa
AA seq
DB search
MNRKKDKGFESPRPFKLTHQVVCINNINFQRKSVIGYVELTIFPTVVNLNRIKLNSKQCR
IYRVRVNELEAPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVSAVDPDAGHGELVIKVP
SELWKQGDDLKVLKVYIEFSLDQPKGGLHFVVPDVEGSMAERGAHVFSFGYQNSTRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLVETIYTHDMRKKTFHYVLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHSMSYLHEIFEFYEEILTCRYPYSCFKTVFVDE
AYVQVSTFASMSIFSTNLLHSAMIIDQTPLTRRCLAQALAQQFFGCFISRMSWADEWVLK
GISGYIYGLYLKKTFGVNEYRHWIKEELDKIVEYELKMGGVLLHPTFIGGKEKDNPTPHL
HFSIKHPHTLSWEYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSQ
MWSQMLLSTHAFLKSISNVSGKDIGPLIKQWVDQSGVVKFFGSFAFNRKRNVLELEIRQD
YTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQEEAISALEK
FPTPASRLALTDILEQEQCFYKVRMQACFCLAKIANAMVSTWQGPPAMKSLFTRMFCCKS
CPNIVKTNNFINFQSYFLQKTMPVAMALLRDVQNLCPKDVLNFILDLIKYNDNRKNKFSD
NYYRADLIEALTNSLTPAISINNEVRTVDNLNADVRLILEEITRFLNMEKLLPSFRNTIT
VSCLRAIRQLQKNGHIPSDASLFKSYAEYGHFVDIRIAALEALVDYTRVERCSAELQWLL
NMVQNDPAHYVRHKILGMLCKNPPFTKTTDSALCNEALVDQLWKLMNSGTSHDWRLRCDA
VNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPELGVGTVMDTPASIGIHGVG
MSYTAVDEEPDPISLGVCGVGQPPQGLKRKAETPLGSPPEPGQVLQQQDDDGRGGRYKIR
FNTMEDEDIDMETVHDSQAFIHHHLNLLERPSTPGKEPPSVEQSMLSMPATPVPSFSKET
TSLSSKHAGEHGHHHHHHHHEHKKKKKKHKHKHKHKHKHESKDKDRERDNSHAYSNSPAS
GRSLRSPSLSD
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagaaggataaaggattcgagagtccgcgcccctttaaattgacccaccag
gtggtgtgcatcaacaacatcaacttccagaggaagtctgtcattggctatgttgagctg
accattttcccgacagtggtcaacctgaacaggatcaagcttaacagtaaacagtgccgc
atctacagggtccgagtcaatgaactcgaagccccattcatttacaatgaccccacactg
gaggtgtgccaccatgagtcgaagcagaggaacctcaactatttctccagtgcctacaca
gcagcagtgagtgctgtggaccctgatgcaggacatggggaactggtcatcaaagttccc
tctgaactctggaaacaaggagatgatttgaaagttttaaaggtgtacattgaattttcc
ctggaccagccaaaaggaggtctccactttgttgttcctgatgtggaaggcagcatggca
gagagaggagctcatgtgttctcctttggataccagaactccaccagattctggttcccc
tgtgtggactcctactcagagctctgtacgtggaagctggagttcaccgtggatgcttcc
atggtggcggtgtcctgtggcgatctggtggagaccatctacacccatgatatgaggaag
aagacttttcactatgtcctccccatccccactgctgcccccaacatctccttggctgtg
gggccctttgaaatcctcgtagatccctacatgcatgaggtgacccatttctgcctgcca
cagctactgccgctgcttaaacactccatgtcttacctacatgagatttttgagttctac
gaggagatcctgacatgccgctacccttattcctgtttcaagactgtgtttgtggacgag
gcctatgtacaagtgtccacctttgcttccatgagcatcttcagtaccaacctgctccac
agcgccatgatcatagaccagaccccgctgacacgccgctgtctggcccaggccttggct
cagcagttctttggctgtttcatctccaggatgtcatgggctgatgagtgggtgttgaag
ggaatctcaggctacatctacggcctctacctaaagaagacctttggagtcaatgagtac
cggcactggatcaaagaggagttggacaagattgtggaatatgaactaaagatgggaggg
gttctgttgcaccctaccttcattggaggcaaagagaaggacaatccaacgccccacctt
cacttctccatcaagcacccacacacattgtcctgggagtactacaagatgttccagtgt
aaggcccacctggtgatgaggctgatagaaaacaggatcagcatggagttcatgctgcag
gttttcaacaagcttctgagcctggccagtactgcctcatcccagaagtaccagagtcag
atgtggagtcagatgcttctgtctactcacgccttcctcaaatccatctccaatgtctct
ggcaaagacataggccccctcatcaaacaatgggtagaccagagtggtgtggtgaaattc
tttggcagttttgccttcaacaggaagaggaacgtgctagagctggagatccgtcaggac
tacacatcatctggaactcaaaaatatgtgggtcccatcaaggtgacagtgcaggagctg
gatggatccttcaaccatacgctgcagatcgaggagaacagcctcaaacatgacatcccc
tgtcattccaagagcagacgaaacaagaagaagaagatccctctgatgaatggagaggaa
gttgacatggatttatcggccatggatgctgactctcctctcctctggatccggattgac
ccagacatgtccattctgaggaaggtggagtttgagcaggctgacttcatgtggcagtat
cagctgcgctatgagagggacgtagttgcacaggaggaggccatctcagcactggaaaag
ttcccaactcctgcctccagactggctctgacagacatcctagagcaagaacagtgtttc
tacaaagtccgcatgcaggcctgcttctgtttggccaagatagccaatgccatggtgagc
acgtggcagggcccgccagctatgaagtccctgtttacccgaatgttctgctgtaagagt
tgccccaacatcgtcaagaccaacaacttcatcaacttccagagctactttctacaaaag
acgatgcctgttgccatggcgttactcagagatgtccagaacctctgtcccaaagatgtc
ctaaacttcatccttgacctcatcaagtataacgacaacagaaaaaacaaattttcagat
aactactaccgcgcagatctgattgaagcgctgaccaactctctgaccccagccatcagc
atcaacaatgaggtgcggacagtggacaatttaaatgctgacgtccgtctcatcttggag
gagatcacacgattcctaaacatggagaaactgctgccgagcttcagaaacaccatcact
gtcagttgtctgagagcgattcgtcagcttcagaagaacggccatattcccagtgacgcg
tcactcttcaagtcctacgctgagtatggacactttgtagacattcgcatcgctgcactg
gaggctctagtggactatactagagttgaaaggtgttcggcagagctacagtggctgctc
aacatggttcagaatgacccagctcattatgtcagacataagatcctgggtatgctctgt
aagaatccacctttcaccaagacaacagactcagctctgtgtaacgaagctctggtcgac
cagctttggaagcttatgaactcaggtacctcccatgactggcggctgcgctgcgatgct
gtgaacctctactacacgttgtttggtttgactcggccctcctgcctccccctgccagaa
ctgggccttgtgctcaacttgaaggagaagaaagctgtcctaaaccccaccatcaagcct
gagctgggggtcggcactgttatggacacgcctgccagtataggcatccatggtgtcggc
atgagctacactgctgtggatgaagagccagatcctatttcactaggggtgtgtggggtg
ggccagccccctcagggcctgaagaggaaggcagagaccccgctgggctcccctccagag
ccaggacaggtactgcagcaacaggatgatgatggaagaggaggccgctacaagatcagg
ttcaacacaatggaagatgaagatatcgatatggagactgttcatgacagtcaggccttc
attcaccatcatctcaatctcttagagagaccctctacaccaggtaaagaaccaccgtca
gtcgaacagtccatgctctccatgcccgccacaccggtgccgtccttttccaaagagacc
acgtctctgtcctctaaacacgccggcgaacatggccaccaccatcaccaccaccaccac
gagcacaagaagaagaagaagaagcacaagcacaaacacaagcataagcacaaacacgaa
agcaaggacaaggacagagagagggacaactcccacgcctacagcaacagcccggccagc
ggcaggtccctgcgctcgccgtctctgtctgactaa
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