Siniperca chuatsi (mandarin fish): 122881152
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Entry
122881152 CDS
T08948
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
schu03015
mRNA surveillance pathway
schu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122881152 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
122881152 (rbm8a)
03015 mRNA surveillance pathway
122881152 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122881152 (rbm8a)
03041 Spliceosome [BR:
schu03041
]
122881152 (rbm8a)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122881152 (rbm8a)
Spliceosome [BR:
schu03041
]
Complex C
Other components
EJC/TREX
122881152 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
122881152
NCBI-ProteinID:
XP_044062894
LinkDB
All DBs
Position
LG9:6506861..6513072
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AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRIKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDLMGQPISVDWGFVRGPPKNKRRTGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggaccttcatgaagcgggaggcgaggactttcctatggatgaggat
ggtgatgaaagcatccacaagttgaaggagaaagccaagaagaggaaaggacgaggcttt
ggctcagaggaaggagccaggtccagaatcaaagaggactatgatactgtggaacaagac
ggggatgagccaggccctcagagatctgtggagggctggatcctgtttgtgacaggggtt
catgaagaggccacagaggaagacatccatgacaagttttctgaatttggagaaatcaag
aatctgcatctcaaccttgaccgcagaacaggctacctcaagggatatgcactggtggag
tatgagacatacaaagaggcccaggcagccatggaagggctcaacggtcaggacctgatg
ggccagcctatcagtgttgactggggatttgtcagagggccccccaagaacaagaggagg
actggtggacggagacgcagcagaagtccggacaggaggcggcgttga
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