Siniperca chuatsi (mandarin fish): 122881188
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Entry
122881188 CDS
T08948
Symbol
cdcp1a
Name
(RefSeq) CUB domain-containing protein 1a
KO
K06732
CUB domain-containing protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
schu04090
]
122881188 (cdcp1a)
CD molecules [BR:
schu04090
]
Proteins
122881188 (cdcp1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDCP1_CUB_6
CUB_CDCP1_2
CUB_CDCP1_1
TMEM154
Cadherin_C_2
RIFIN
Sigma_reg_N
Glucos_trans_II
Orf78
LAX
DUF6377
Motif
Other DBs
NCBI-GeneID:
122881188
NCBI-ProteinID:
XP_044062973
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Position
LG9:complement(17537925..17547478)
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AA seq
824 aa
AA seq
DB search
MSLSGVTLQILLLAVIVFTVSGVQKLTVTPERGTTLNISSSLPKGCKVCTRAGRSRQCNT
FLLLRDNTPVSVEFECSRPQDVFSVETVQNIECTIKSCNSHIIQADSALLPLLDFNRKFT
WNLKASAPKAFKIDFSNTGLRQINPSERCPDRHSYALQAFQTTGNVVVGKYCRTGTIRSA
QILNQGSFSLDVPAGQKLQNGQFDVSVGEEIKSLAKITLMLPKGASSSELLSPNYPDSFP
DDDVMEWYFQVPDTHKTAVQLLKLTQPRCLKKDTAVEYHSKGRGALVLRLTDPQPEQDRG
NFSLTLRNCEMDRRVAGSPGLSINLKVSSSSKSSLVLCKVDVSKLEDLSLHIEKLRPASA
CEMKINSVPKEKITVTSNSDLTFQDCLPEDVQVTAMRVIVCNQLKDCPKTPASLSVPLLP
TCLPAPLSSVTWTLRPPRHGTVELTSPTGSIKQSLPGQPCNDSIVIKVAEDGGTTVGHFC
PQGSIQKVQIHTNVSVTVSGMGGKALRTSFKDVLNVRLKEEISERYIFTVSPKRDTPVLL
ATPGWPVGMKSYSTVSWIVTVPTSMDAHLMFANLSQPKCSNRHTNIRVQRVGYLTEDYSR
REDEEAEREITVSQSFYLNMSNCMPERGNFSVITKITLQNSKNLLTIILSVVAALFVVFV
IVLVSVCVVIRKKKKKKQKKLNYQVSIYNPNDTSFLPGPNGFPKTREDNESHVYASIEDT
LVYTDLLRKGSEIGVYGEFDTYRPFTGHTDSQKPLVSKNTGADDMQVGANQQFGVSSQEA
PPLPIRPSSHNQSLVDNEIYQTEDQSEEEHSPNMGPRLGPEGGN
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtccctatcaggagtcactcttcagattttacttcttgcagtcatcgttttcactgta
tcaggggtccagaagctgaccgtcacccctgaaagaggcaccaccctcaacatcagcagt
agtctgcccaaaggttgcaaagtgtgcaccagggcaggacgctcacgacaatgtaataca
ttccttctgctaagagacaacacccctgtctcagtggagtttgaatgctccagaccacag
gatgtattcagtgtggaaactgtgcaaaatatagaatgtaccataaagtcgtgcaacagc
cacatcatccaggctgactccgccttgcttcctttgctcgattttaaccgcaagttcacc
tggaacctaaaggcctctgcgccgaaagcgttcaaaatagacttcagcaacaccggtcta
aggcagattaatccatcggagagatgtccagacagacacagctacgccctccaggccttc
cagactacagggaatgtggttgtagggaaatactgcagaacaggaactatccgtagtgct
cagatactgaatcaaggtagcttttctctggatgtcccagcaggacagaagctgcaaaat
ggccagtttgatgtgtctgttggggaggaaatcaaatcccttgccaaaattacattgatg
ttaccaaaaggggcctcgtcctcagagttgctctctccaaactacccagacagttttcct
gatgacgacgtgatggagtggtactttcaggttccggacacacacaagacagctgttcag
ctcttaaagctcacacagccacgttgtctgaagaaggacacagcagtggagtaccacagc
aaagggagaggggcgttggtgctgaggctgacggacccccagccggagcaggatcgggga
aacttctccctgacgctgaggaactgcgagatggacagaagagttgctggttctcctgga
ctgtccataaacctcaaggtgtcttcttcaagtaaaagttcactagtgttgtgtaaagtg
gatgtgagcaaactggaggacctttctcttcacattgagaagttgagaccggcctctgcc
tgcgagatgaaaataaactctgtgccgaaggagaagatcacagtcacgtcaaacagtgac
ctgactttccaggactgccttcctgaagacgtacaagtcactgccatgagagtcatagtg
tgcaatcaactcaaagactgcccgaagactccggcctctctgtcggtgcctctgctgccg
acctgcctccccgcccctctgagcagtgtgacctggactctccgtcctcctcggcatggc
accgtggagctgacctctcccaccgggtcgatcaagcagtccctacctgggcagccatgc
aatgacagcatcgttatcaaagtggccgaagacggtggcactaccgttggacacttctgc
cctcagggatccatacagaaggtccaaatccacaccaacgtgtctgtcactgtgtccggc
atggggggtaaagctctgaggacgtctttcaaggacgtgttgaatgtcagattgaaagag
gagatatcagaaagatacatattcaccgtatctccaaagagagacacccctgtccttttg
gctactcctggttggccagtaggaatgaaatcttactccaccgtctcctggattgtcacc
gttcccacgagtatggatgctcacctgatgtttgccaacctcagccagcccaagtgcagc
aaccgccacaccaacatcagggttcagagagtcggctacctgacggaggactacagccgc
agggaggatgaggaggccgagagggagatcaccgtctcccagagcttctacctcaacatg
tccaactgtatgcctgaaagaggaaacttcagcgtcatcaccaagatcaccctgcagaat
agcaagaacctgctgactatcatcctgagtgtggtggctgctctgtttgtcgtttttgtc
atcgtgctggtatcagtttgtgtggtgattaggaagaagaagaagaagaagcagaagaag
ttgaattatcaagtgtccatctacaatccaaacgacaccagtttcctgccaggacccaac
ggcttcccaaaaacacgtgaagacaacgagtcccatgtgtacgcctccattgaggacacg
ctggtctacacagacctcctcagaaaggggtcagagatcggcgtctacggagagtttgac
acataccggcccttcacagggcacacagactcacaaaagccactggtctctaaaaacacc
ggtgccgacgacatgcaagttggggctaaccagcagtttggggtctcatctcaagaggct
cctccacttcccatcaggccttcgagccacaaccaatccctggtggacaatgagatttac
cagactgaggaccaaagtgaggaggaacattctcccaatatggggccacggctggggcca
gagggaggaaactga
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