Siniperca chuatsi (mandarin fish): 122881349
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Entry
122881349 CDS
T08948
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122881349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122881349
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122881349
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122881349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
RING_XB3-XBAT31
PQQ_2
zf-C3HC4_2
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
122881349
NCBI-ProteinID:
XP_044063353
LinkDB
All DBs
Position
LG9:15274484..15276529
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AA seq
414 aa
AA seq
DB search
MAKSPASLSCGSLSPEGILREIQINLLECKVCFEKFSTQQREHRPQNLSCGHVLCLECIT
ALSHPLLRKLECPFCRQLCSVEGTSHCQVLSDLQELLLSWSPPSSAPPHRAKGGLDLAAG
LTSTALHLCTAFGGWGTLINPIGIAVLGSSGTIVVVHDGEKRVVVFSQQGKKLHSFGRRG
QASGEICYPVDVAVTLCGYVVVTDAGNKAVKVFTSRGNHVMTVKESFQMPWGVDTDSCGH
ILVSDVQAGTLSQVKVDYTHGLILEHQTAISDLKHPKAVACCRVTGNTAVMEHLPGDTYP
PGRHQHTRLRVFTKDFHLLCQTDSFSLTLQSTVRLYMSGVAFDRDGDVIVIDSSQGMIWS
LGKLQNGPALTPLVGDHLIRPVGLVSLNNTVVILDSGDHTVKIYSAKSDARGMI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggccaagagtcctgcttccctgagttgtggtagcctgagccctgaggggattctgaga
gaaatccagatcaacttactggagtgtaaagtctgcttcgagaagttcagcactcagcag
agggagcacagaccacagaacctttcctgtggccatgtactctgtctggaatgcatcacg
gctctgtcccaccctctcctgaggaagctggagtgcccattctgtcgacagctgtgcagc
gttgagggcacctcccactgccaggttcttagtgacctgcaggagctgctgttgtcttgg
agtcccccatcctctgctcctcctcacagggcaaagggaggccttgacttggccgcaggt
ctgacatccactgctttgcacctctgcacagcttttggtgggtgggggactcttatcaac
cccattgggatagccgttttggggtcttcagggacaatagtggtggtgcatgatggagag
aagagggtggtggtgttcagtcagcagggcaagaagctgcacagttttgggcgaagagga
caagccagtggggagatctgttacccagtggatgtagcggtgactctctgtggttacgtg
gtagtgactgatgcaggaaataaagctgtgaaggttttcacctccagggggaaccatgtg
atgacggtcaaagagtccttccagatgccctggggtgtggacacagacagctgtgggcac
atcctggtatcagacgtccaggccggcacgctgtctcaggtaaaagtggactatactcat
ggtctcattctggagcatcaaacagccatttcagacctcaagcatccaaaagcggtggcc
tgctgtcgggtgactgggaacactgcagtgatggagcatctacctggtgacacgtatcca
ccagggaggcaccagcacacaaggttgagagtgtttacaaaagacttccacctcctttgt
cagacagatagtttcagcctgaccctgcagtccacagtgaggctgtacatgtcaggagtg
gcctttgacagagatggagatgtgattgtgattgactccagtcaggggatgatttggagt
ttggggaagctccagaatggcccggccctgactcctcttgtgggagaccaccttatccgc
ccagttggactggtgtcactgaacaacacggtcgtcattctggacagtggagaccacaca
gtgaagatttattctgctaaatctgatgctaggggcatgatatag
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