Siniperca chuatsi (mandarin fish): 122881623
Help
Entry
122881623 CDS
T08948
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122881623 (sntb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122881623
NCBI-ProteinID:
XP_044063984
LinkDB
All DBs
Position
LG9:complement(18032777..18076432)
Genome browser
AA seq
549 aa
AA seq
DB search
MAVVIATGVSGASGVQKSGSVEVLVRQQWHKVLVNLNEEALTLSCEESVVNDKLNDSVNS
NGVTNGSYLDNNNTNSNNGPQTVRTAFTDLPERVPEAIANRKRCVKVTKQEVGGLGISIK
GGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGMNLRDATHDEAVQALKRAGKEVT
LEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGSPPITSSSDPPSPPTQPSLSLQGDR
RCIPLKMCYVTRAMTTPDPENRQLELHSPDARHTVVLRCPDQPSALSWFSAMHSVTSTLA
QRALAEVIQNTARTGVAGSKEIRHLGWLAGKTESEKQCWKPVLVVVTEKDLLLYDNLPRG
KEAWQSPAHTYPLLATRLVHSGPDRGSPHSGTELFFATRTGTRLGIETHLFRAETTKDLS
MWTRQIVNGCHASAEMIKEVTTSCLYRGQECRLVIHYEQGFSVLADPKLEDRENGEERAA
HTPSRPRVLLSYPYEKLKMSSDDGVRMLFLDFGGKEGEIQLDLHSCPKTIVFILHSFLSA
KISRLGLVA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtaatagcgacgggagtttcaggtgcctctggggtgcaaaaaagtggatct
gtggaggttttggtacggcagcagtggcataaagttttggtcaacttgaacgaggaagcg
ctcacgttaagctgcgaggagagcgtcgttaacgacaaactgaacgacagtgtcaactcc
aacggcgttaccaacggatcttaccttgacaacaataacaccaactccaacaacggcccc
caaactgtgcgcaccgcgttcacggacctcccggagcgagtgcccgaagcgatcgccaac
agaaagcggtgcgtcaaggtgaccaagcaggaggtcggaggacttgggatcagcatcaaa
ggggggaaggagaataaaatgcccatcctcattagtaagatattcaaggggctcgcagcg
gaccagacccaggctctgtacgtcggggatgccatcctgtctgtgaacggcatgaacctg
cgggacgcgactcacgacgaggctgtgcaggcgctaaaacgggccgggaaagaggtgaca
ctggaagttaagtacatgcgcgaagcaacaccatacgtcaaaaagggctcgcctgtgtct
gagatcggctgggaaaccccccctcctgagtctccccgtctcggcagccctcctatcacc
tcctcatctgaccctccgagccctcctacccagccatccctatctctgcagggcgacagg
aggtgcataccactcaagatgtgttatgtaacccgagccatgaccacaccagaccctgag
aacagacaactggagctgcattcccctgatgccaggcacaccgtggtgctgcggtgccca
gaccaaccatctgccctgtcctggttttctgccatgcactccgtcacatccacactggca
cagcgggcactggcagaggtcatccagaacacagccaggacgggggttgctggcagcaaa
gagatacgacacctgggatggctggcagggaagacagagagtgagaagcagtgctggaag
ccggtgctggtggtggtgactgagaaagacctgctgctgtatgacaatctaccacgaggc
aaggaggcctggcagagccctgcacacacttatccacttttagcaacacgtctggtccac
tctggccctgaccggggatcgcctcactctggtacggagctgttctttgccactcggact
ggcacacgactgggcatcgagactcatctgttccgggctgagaccaccaaggatctgtct
atgtggaccagacaaatagtcaatggatgtcacgcctcagctgagatgatcaaagaagtc
actacgagttgtctataccggggtcaggagtgccggctggtgattcactacgaacagggc
ttctctgtgctggctgaccccaaactggaagacagggagaatggggaagagagggcagct
cacacacctagcaggccccgggtgctcctatcttacccctacgaaaaactaaagatgtcc
tcagatgatggcgttcgcatgctcttccttgacttcggagggaaggagggggaaattcaa
ctggacctccactcgtgtccaaagacgattgtcttcatcctccattcattcctctctgct
aagatctcccgcctgggtctggtggcctga
DBGET
integrated database retrieval system