Siniperca chuatsi (mandarin fish): 122881686
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Entry
122881686 CDS
T08948
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122881686 (cdh17)
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Major cadherins
122881686 (cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RET_CLD1
Cadherin_4
Cadherin_CELSR2_9th
RibLong
Fibulin_C
Cadherin_2
Cadherin_5
MadL
Phage_tube_C
Motif
Other DBs
NCBI-GeneID:
122881686
NCBI-ProteinID:
XP_044064135
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Position
LG9:14205115..14220514
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AA seq
871 aa
AA seq
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MTPMVHLLLLPLLFSIAAGKDLEEKKGPFENTELHVPEGTPVPYPIHQFQVTHPGVNNFR
LSGEGKEDIQISRDGWLYLEKPLDWSQDDHYMIMVEALADDEVVHGPVYVIINVLDINNN
APYFNQSDYTAVVRENNPAGVPFTRVFALDQDNPQTPNAHLTYSLVSQIPNKHNILLFQI
DPNTGVISTTEEGQQGIKAREGIQYGRGEDQSIDALRTKFNNYCPVQQVPYEENPFFTCV
ERAEMRRRNFAPLEDPDYTLTVRVQDLGGASETALSGNARVHIVVQQNLWFNPGPLTVKE
HLNETYPLVIAKVQSNDLNAIYTLVQKERVLKFPFQITEDGEIHLTEELDREDKDMYILV
VMATDNSGKEVDPPMEIQVLVEDVNDNAPVCENEESVFEVQEDEPLGVLIGQLLARDDDE
DGTLNAQLTYTIMSQNPPTTPNAFSIEAASGRIQALRSLQRKDQQVYNLNVRVNDPVFST
DCKVVIKVIDVNNEMPQFEKNDYGSHTLAEDTPVGHTVLTIRATDADDPDSGSSRIEFHI
SAGNDDYVFAVETDGKGVGQLVIVKPLDFESSPTRKLQIDARNPEPLMEGLEYGNESTAF
VSVSVTDVDEAPEFSMDILDVTVPENTTKGSVLLTVEAKDPEGKEIGFKLDGDTQGWLEI
DAATGQIKTKDKLDRETLETFKVTVTAFEKGNPEKYSERVVSVRLLDVNDNVPKLTETQA
FICVAKNEPIIIKAKDGDSAPFSQPFTFTLGNGKKSPNWELRSIDGTTAQLTLKKKTTED
KTFTLPINIKDSAGMGVTQPFEVRVCNCTELGYCYMAPDERGFKYGMGTTIGILVGTMGF
CIILFIIVINRIKKQGKKKVRTEEEERNAMM
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatggtgcatctgttgttgctcccactcctgttcagcattgctgctgggaag
gatctggaggaaaagaagggcccatttgagaacacggaactacacgtgccagaggggaca
ccagtgccgtatcccatacatcagtttcaggtgacccatccaggcgttaataatttcagg
ctgagtggggaaggtaaggaagacattcagatttcaagggacgggtggctgtacctggag
aagcctctggactggtctcaagatgaccattacatgatcatggtggaggcgttggcagat
gatgaagttgtgcatggcccagtttacgtgatcataaatgtgttggacatcaacaacaac
gctccgtacttcaaccagagtgactacacagctgtggttagagaaaacaatccggcagga
gtcccatttacccgtgtgtttgcgttggatcaggacaacccacaaactcccaacgctcat
ctgacctacagcctggtcagccagatccccaacaaacacaacatcctcctgttccagatc
gaccctaacactggagtgatctccaccacagaagaagggcaacagggcataaaggccaga
gagggcatccagtatggcagaggagaagatcagagcattgacgcactgaggacaaagttt
aacaactactgtccagtgcagcaggtcccctatgaagaaaaccccttcttcacctgtgtg
gagagagcagaaatgaggaggaggaattttgcccccctggaggacccagactacaccctg
actgtgcgcgtgcaggacctgggaggagcgtcggagaccgcgctgagtggaaacgcaaga
gtgcacattgttgtgcagcaaaacctgtggttcaatcctggaccactaactgttaaagag
cacttaaatgaaacttaccctctggtcatcgcaaaggtccagtctaatgatctcaacgcc
atctacacgttagtgcagaaagagcgggtgctgaaattccccttccagatcacagaggat
ggagaaatacatctgacagaggagctggacagagaagacaaggacatgtacatcctggtt
gtgatggcaacggataacagtggcaaagaggtggatccacccatggagattcaagttttg
gtggaggacgtgaatgacaacgcacccgtgtgtgaaaatgaggagagtgtatttgaggtg
caggaggatgagcctctaggcgtcctgattggacagttgttggcccgtgatgacgatgaa
gacgggacactgaatgctcaactgacttacaccatcatgtcccagaatccacccactaca
cccaacgccttctccattgaggctgcttctggaagaattcaggcattgcgctcgctgcag
cgaaaagaccaacaggtgtataacctcaatgtcagagtcaatgacccagttttcagcaca
gattgtaaggtcgtcatcaaggtcattgacgtcaacaatgagatgcctcagtttgagaag
aatgattatggcagtcacactctagcagaggacactcctgtgggacacacagtgctgacc
atcagagcaacagatgctgatgacccagacagcggcagctcccgtatcgagttccacatt
tctgctggcaacgacgattacgtttttgctgtggaaactgacggcaaaggtgtcggccaa
ctggtcatagtaaagcctctggactttgagtcctctcccacccgcaagctccagattgat
gctcgtaacccagagccactgatggaaggtctggagtacggcaacgaatccacagccttc
gtctctgtgtctgtcactgacgtagacgaggctccagagtttagtatggacatcctggat
gtgactgtgcctgaaaacaccaccaagggatcagttctgctcacggtggaggcaaaggat
ccagagggcaaagagatcggttttaagttggacggtgacacccagggctggctggagatc
gatgctgcaacaggacagatcaagaccaaagacaagctggacagagaaaccctggagacc
ttcaaagtcaccgtcactgcatttgagaaggggaacccggaaaagtattcagagcgtgtc
gtgtccgtgaggctgctggatgtgaacgacaatgtccccaaactgacagagacccaggcc
ttcatctgtgtggcgaaaaacgaacccatcatcatcaaggccaaagatggagacagcgcc
cccttctcccagcccttcaccttcaccttgggtaacggcaagaaatctcccaactgggaa
ctgcgcagcattgacggtacaacagctcaactgaccctcaagaaaaaaacaactgaagat
aaaaccttcacactccccattaacattaaagacagtgcaggcatgggagtcacacagcca
tttgaggtgagagtatgtaactgcacagagctgggctactgctacatggcaccagatgaa
cgtggcttcaaatatggaatgggaaccaccatcgggatcctggtcggcactatgggattc
tgcattattctcttcattatagtgatcaatcgcataaagaaacagggcaagaagaaagtc
cggactgaagaggaagagaggaacgccatgatgtag
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