KEGG   Siniperca chuatsi (mandarin fish): 122881764
Entry
122881764         CDS       T08948                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122881764 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:schu03400]
    122881764 (xrcc1)
DNA repair and recombination proteins [BR:schu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     122881764 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 122881764
NCBI-ProteinID: XP_044064288
LinkDB
Position
LG9:complement(7668684..7689849)
AA seq 625 aa
MPEIKLKHVVSCSTEDTTFKADNLLSSDTYRKWKAARPGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVKDQDYEVLLVTSSFMSPTESRNSTNMSRVRFFGPHQLQKSTA
QEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKNDPPPTTPPKLTKLGQFRVKDESPSS
GPSLQPGSLFFNRDNANKSNTSLKVSPQSQKLSYAAAALQAGGSSHSPGQASTSSSPSPQ
LPAKRKFEFSKERQSASGPPPSKKISPAGSPEGKAATPKHKPSPTSTPSPSTAKASPAQK
FANKKRESQSKPEPKPKQQKAKSQSAQQVPLNQIMQGVVFVLSGFQNPFRGELREKALDM
GAKYRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKISYKRYLMDG
AESSSESEMEVDDQSEEEMNTKTPQKRQVTPKKTPEKRNEDDEYACSTDVDEPGGDDGES
AVDTEDELQRVENESRKKKAAEGKVVKEEDPYGGSTDENTDAEAEEDHPIPELPDFLSGK
HFFLYGKFPNNERRLLLRYIVAFNGVIEDYMTEKVQFVVTSEGWHESFEDALMENSNLNF
VKPAWIYAINERQKMLPYQPHSVVP
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgccagaaatcaaactcaagcacgtcgtgtcttgcagcaccgaagacactactttcaag
gcagacaacctgctgagctctgacacctacagaaagtggaaagcagcaagacccggggag
aagcagacatcagtcattctgcagtttgagaaggaggagcaggtgcacagcattgatatt
ggaaatgaagggtcagctttcatcgaggtgttggtggggaactcttcagctgtcaaagac
caggactatgaggttcttttggttacgtcttccttcatgtcccccacggagagccgtaac
agcaccaacatgagccgggtgcgtttctttggaccccaccagctgcagaagagcacagca
caggagaagtgggacagagtgaaaattgtgtgtagccagccatacagcaagaacatagca
tacggactggcctttgttaagtttcattcaccgcctgacaaaaatgatcctcctccaaca
acccctccgaaactgacgaagttgggacagttcagggtgaaggatgagtctccttcatct
gggcccagccttcagcccggcagtctcttcttcaatcgggacaatgcaaacaagtccaat
acttcacttaaagtgtctcctcagagtcagaagttgagttatgctgctgctgccctgcag
gctggtggcagctcccactcaccaggccaagcttccacctccagctctccctcacctcag
ctaccagcaaaaagaaagtttgagttcagcaaagagcgacagtctgcctctggccctcca
ccctcgaagaaaataagcccagctggctcacctgagggcaaagctgcaacccccaaacac
aagccaagcccaactagtacaccaagccccagcaccgcaaaagcttccccagcacagaaa
tttgctaacaagaagcgggagagccaatccaaacccgaacctaaacccaaacaacagaaa
gctaaatcccagagcgcacagcaggtcccattgaaccagataatgcagggggtggtgttt
gtcctcagcggcttccaaaaccccttcagaggggagcttagggaaaaggctctggacatg
ggagccaaataccgacccgactggacacctgactccacacacctcatctgtgccttcgct
aacacccccaagtacagccaggtgaaatcagcagggggcatcatcgtacgcaaggaatgg
gtaatggactgccataagaggaaacagaagatctcctataaacggtatttgatggatgga
gcagagtcgagctcggagagcgaaatggaagtggatgaccagagtgaagaggaaatgaac
acaaagactccacagaagagacaagtgacccccaaaaagacaccagaaaaaaggaatgaa
gatgatgagtatgcttgctccactgatgtggatgaaccaggaggtgatgatggtgaatct
gctgtggatacggaggacgagctgcagagggtggagaatgagagcagaaagaagaaagca
gcagaagggaaggtggtgaaagaggaggatccatacggggggtcgacagatgaaaacaca
gacgctgaagctgaagaggatcaccccattcctgagctaccagactttctgagcggaaag
cactttttcctctacggtaaattccctaacaacgagaggcgcctactgttgcgatacatt
gttgcctttaacggagtgattgaggactacatgacagagaaggtgcagtttgtggtgacc
agtgaagggtggcacgagtcctttgaagacgcgctgatggagaacagcaatctgaacttt
gtcaaacctgcatggatttacgcaatcaatgaacgacaaaagatgctgccctatcaaccc
cactctgtcgtcccctga

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