Siniperca chuatsi (mandarin fish): 122881831
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Entry
122881831 CDS
T08948
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122881831
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122881831
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
122881831
NCBI-ProteinID:
XP_044064405
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Position
LG9:9602933..9611427
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AA seq
628 aa
AA seq
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MDQAILSQSSASDLLEPDSEEFLLRVDFFRKLGYSSAEVKAALRKLGLNTDTNAVLGELV
RSRTGTAPCMSSSDSDESTGQKDPLLPPSWALGPCRMKPQQTTDTELKPVIIDGSNVAMS
HGNKEVFSCRGIQLAVKFFLDRGHNTITVFVPTWRKEQPRPDAPITDQHILIELEKRNIV
VFTPSRRVGGKRVVCYDDRFIVKCAYESDGVIVSNDTYRDLQGERPEWKKCIEERLLMYS
FVNDKFMPPDDPLGRRGPSLDNFLRKKPLPTEQKRQLCPYDKKCTYGIKCKFYHPERANH
SYLSLADELREKAQISTVKEERNARLSPRQLQSDPGHAHNACFHPHDSNTEYIKDQQSSS
HPGQVSENTLLYWEDPRKGQNHMPCSVTGSQCQKEWPGLHSVPNHYYANISHEYLDSGFV
SHESQYSDFSHCPSNSHRLRPEQQSALAGPRHTSVHLEKNNTSQSCRCCSHVVPSTAHQQ
QHGNLDSKGQPKHNTYPSHLFPSGVPHQHSLPSHLYYTRAPYHQQNYLSDPFLALSQART
SCSLPSSVHSSHSHNSCCSYKDHQYHSWGQQQLSTAAFAPQRLELRKKLQAIFNPHQVDT
VMEMFPHLMDAEKLAAEILNLKAQRGIF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggcaattctcagccagagctcagcttcggacctgcttgaaccagacagtgag
gagttcctgctcagagtggacttcttcaggaaactgggttactcctcagcggaggtgaag
gctgctctgaggaagctgggcctaaacacagacactaacgcagtgctgggagagctggtc
cggagcaggaccggcactgcaccctgcatgtccagttctgacagtgatgagagtacaggc
caaaaggaccctcttctgcctcccagttgggcacttggaccctgcagaatgaaaccacaa
cagactacagacacagaattgaagcctgttattatcgatggcagcaatgttgccatgagt
catggcaacaaagaagtgttctcatgccgaggcatccagctggcagtgaagttcttcctg
gacagaggtcataatactattactgtgtttgttcccacttggcgcaaagaacaacccaga
cctgatgcccccataacagatcagcacatcctgatagagcttgaaaaacggaatatagtg
gtcttcactccatcgcgccgtgttgggggtaagcgagtggtttgctatgatgaccgcttt
atcgtcaagtgtgcatatgagtcagatggagtgatcgtatccaatgacacctaccgtgac
ctccaaggagaaagacctgagtggaagaaatgcatcgaggagaggctcctcatgtactcc
tttgtgaatgacaagttcatgcccccagatgaccctctgggtcgccgtggccccagtctt
gacaacttccttaggaaaaagcctctgcctacagagcaaaaaagacagctttgtccatat
gacaaaaagtgcacttacggcattaaatgtaagttctaccatccagagcgggcaaaccat
tcctacctgtccttggctgatgaattgcgagagaaagcccagatttccactgtaaaagaa
gagagaaatgccagattatcacccagacagcttcaatctgatcctgggcatgctcataat
gcctgtttccatcctcatgactctaacacagagtacataaaagaccagcaaagttcttca
catcccggtcaggttagtgaaaatacactgctgtactgggaggatcctagaaaaggtcag
aatcatatgccctgttctgtaacaggaagccagtgtcagaaagagtggcctgggctgcac
tcagtgcccaatcattactatgccaacatctctcatgagtacctggattctggctttgtc
tctcatgagagccagtactctgacttttcgcattgccccagcaactcccacaggcttagg
cccgagcagcaaagtgctctcgctggacccagacatacctcagtgcatttagaaaaaaat
aacaccagccagtcctgcaggtgctgttcccatgtagtgccctcaacagctcatcagcaa
caacatggaaacctggactccaagggtcaacccaaacacaacacctacccttctcacttg
ttcccatctggtgtgccacatcaacacagcctccccagccatctctattacaccagagcc
ccatatcatcagcaaaattacctgtcagatccctttctggcgctgtcccaagccaggaca
tcatgtagtctcccctcttcggtccattcctcacactcccacaactcttgctgctcttac
aaagatcatcagtaccattcctggggccaacaacagttatccactgctgcatttgctcca
caaaggttggaactccgcaaaaaactgcaagccatcttcaacccacatcaggtggacaca
gtcatggaaatgtttccacatctgatggatgctgagaaactggctgcagagatcctcaac
ctgaaggcacagagagggatattctga
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