Siniperca chuatsi (mandarin fish): 122881857
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Entry
122881857 CDS
T08948
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122881857
Membrane trafficking [BR:
schu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122881857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
SPA
Motif
Other DBs
NCBI-GeneID:
122881857
NCBI-ProteinID:
XP_044064464
LinkDB
All DBs
Position
LG9:complement(1627531..1684954)
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AA seq
1525 aa
AA seq
DB search
MNCAEERGNDIGGQTGGMTEEKCPQLVDYFVVAGLDPAGPWRPLDEDGKTSTNSSSTPSS
SSLSSSGRAVESVTDLAVIARGLGEEVPEGFTCIEKTLGGHSAELSAGLINNPHLYLCYR
RGRDKPPILDLGVLYEGKEQLKQGWYIIETTPYSRSANLSTGGAPTAHRVFLTYRRALDT
QGLHTLGVTDIALLLPSKGEVAPHTFCRVDKNLNTGMWGPALYVCYKRAVAKANALVYKA
SLISRYPEEDLEAFPLPESVPVFCLPMGVTVESWPLNTKYQLPVFSTFVLTSASGDKVYG
AAIQFYESFSRELLSERQSVRLGLLSVVDRRPITNRSLQVKKSICVLSHWPFFTVFQKFL
TFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLS
GASFLKLLQNLGPENACTLLLAVLTEHKLLLHSLRPDVLTSVSEALVSMSFPLRWLCPYI
PLCPLQMADVLLAPMPFIVGVHSSYFDLYDPPTDVVCVDLDTNTIFQLEDKKPLSWRSLP
RKHGKTLFNTLTNLHKTLEKICTPGQEEATLEFLLTDYDQIYRSQKQLELEIQEAFLRFM
SCLLRGYRTFLLPITQAPSDTTTDCSSLFNLQGFLKSRDRTQQKFYSQLTRTQMFTQFIE
ECSFVSDRHACLEFFDECVQKVDVEKPEEVRLIDLDETHGGEHTVFIMPPEEPQEPDGSE
CPALYSYETFPTLKPELFDRPQDQLRVPAKGSAPSSPAPRRTKQEIKLAQKRAQKYSAVP
DMWSKCLLGHCYGLWFIYLPTFVRAESAKVRALHTAYDVLKHMENRKVVLPDEVCYRILM
QLCGQYGQPVLAVRVLLEMKKAGITPNTITYGYYNKAVLESKWPSTSQGGRLRWAKLRNV
LLAVAHFRQPIKQRQKSGSVGSRGEAMAYPDQRPRPHSSLIRQSSWSGLSESSSHESLTG
SLVKSNSLNSMKTSTDKKKKSVLRNEGTNGCGDGVSRKPPMGRRDTSTPPPAPPGGVLVR
RSQVCLSTFYKECAETADSEPDCSCQPAERDGRPVGTRDSAGSHKVVDENYNNVSSPSRG
GLAGKLQQLLTPTKNRVSVRRAASVDDRRGGLGRRLCEQRQSRKAQVAETLLKAKERLVT
ATSESSLSVGSDLDLADTPSPAYPLRRSWDANQEGTGLEVLMSSCSLCRSCNSLVYDEEI
MAGWTSDDSNLNSCCPFCCASFVPFLNAEICDLGPLSSAERSNWNVEDEVESAVRPPSGQ
EASLRHQCNGLSEDSSSETSSYSETSRTTTGSSGAGAPQVTVAYLSPLVLRKELESLLEN
EGEAVLAQPQFLDNHSIIFWNLVWYFQRLSLPSNLLQLVRASPLVSQFTQLENSAVRVRL
LWDTLTPDTDQWPPLYILWRIHSGVPMRSYSWRRHNHPFTLSFLEEVLRWVGMNEVHKAV
TLFLDTLAKQPGSAWTQRSLYREFLFLTLAAMGKDHVAAFDKKYKAAYSRLSSTLGREEL
HKKRAQPPSPKAIDCRRSFHPPLEC
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtgccgaggaacggggcaatgacattggagggcagacaggcggcatgacagag
gagaaatgtccccagctggtggactactttgtagtggcaggtctcgaccctgcggggccc
tggaggcccctagatgaggatggcaagacgtccaccaactcctcctccacgccctcctcc
tcttccttgtcttcgtcgggccgagctgtggagtcggtgacggacctggcggtgatcgcc
cgggggctcggggaggaagtgccagagggcttcacctgcatcgagaagacacttggtgga
cactcggccgagctgagcgccggcctcatcaacaacccacacctgtacctgtgctaccgc
cgaggacgggacaaaccgcccatactggacctgggggttctgtatgaggggaaggagcag
ctgaagcagggctggtacatcatcgagacaacgccttacagccgctcggccaacctgagc
accggcggtgccccaacggctcaccgggtgttcctgacgtaccggcgggctctggacaca
caaggcctccacacgctgggcgtcacagacatcgccctgctgctgcccagcaagggagag
gtcgccccgcacaccttctgccgcgtcgacaagaacctcaacaccggcatgtggggtcca
gctctgtatgtgtgctacaagagagctgtggccaaagccaacgccctggtctacaaggcc
agtctgatcagccggtacccagaggaggacctggaggcgtttcctctgccggagtcggtg
ccggtcttctgtctgccgatgggtgtcaccgtggagagctggccactaaacactaagtac
cagctgcccgtcttctccaccttcgtcctcacctccgcctctggggacaaggtttacgga
gcagccatccagttctacgagtcgttctccagggagctgctgtcggagcggcagagcgtg
aggctcgggctgctcagcgtggtcgaccggcggccgatcaccaaccgcagcctgcaggtg
aagaagagcatctgcgtcctctcccactggcccttcttcaccgtcttccagaagttcctc
accttcgtctacagatactccatctccggaccccacgtcctgccgctcgaaaaacacatc
tccagcttcatgcacaacgtcccgtttccctccccccagcggccacgcatccttgttcag
ctgtctccgtatgacaacctgctgctctgccagccggtctcctctccactcccactcagc
ggtgcaagcttcctgaagctgctgcagaacctcggtccagaaaacgcctgcacgctgctg
ctcgccgtcctcactgaacacaaactgctgctgcactcgctccgccccgacgtcctcacc
tccgtcagcgaggcccttgtctccatgagtttccccctgcgctggctctgtccctacatc
cctctgtgtccgctgcagatggccgacgtgcttctggcgccgatgcccttcatcgtgggc
gtccactccagctactttgacctgtacgacccccccactgatgtggtgtgtgtcgacctg
gacaccaacaccatctttcagttggaggacaagaagccgttgtcatggcgatcgttaccc
aggaagcacggcaagaccctgttcaacaccctcaccaacctccacaagaccctggagaag
atttgcactcccggtcaggaggaggcgacgttggagttcctgttgactgactacgatcag
atctacaggagtcagaagcagctggagctggagatccaggaggcgttccttcgcttcatg
agctgcctgctgcgaggataccggaccttcctgctgcccatcacccaggcaccatcggac
accaccaccgactgcagctccctgttcaacctgcagggtttcctgaagtctcgggatcga
acgcagcagaagttctacagtcagctgacgaggactcagatgttcactcagttcatcgag
gagtgctccttcgtcagcgaccggcacgcctgcctcgagttctttgacgagtgcgtccaa
aaggtggacgtggagaagccggaggaggtgaggctgatcgatctggatgagactcacggc
ggagaacacacagtcttcatcatgcctcctgaagaacctcaggaacctgacgggtcggag
tgtcccgccctctacagttatgaaaccttccccacactgaagccagagctctttgaccgg
ccccaggaccagctccgggtccctgctaagggcagcgcccccagtagtcccgccccccga
cgcacaaaacaggagatcaagttggcccagaagcgagctcagaagtactcggcggtgccg
gacatgtggtctaagtgcctcctgggtcactgttacggcctctggttcatctacctgccc
acctttgttcgggcggagagcgcaaaggtgcgcgcgctgcacacggcgtacgacgtcctc
aaacacatggagaatcgcaaggtggtgctgccggatgaggtgtgttacaggatcctgatg
cagctgtgcggtcagtacggtcagcccgtcctcgctgttcgagtcttgctggagatgaag
aaggctggaatcacacccaacaccatcacctacggatactacaacaaggcagtgctggag
agcaagtggccctccaccagtcagggtggacgtctccgctgggccaagctgaggaacgtc
ctgctggctgtggcccatttcagacagccaatcaaacagcgccagaagagcggctcagtg
gggtcgcggggagaagcgatggcgtaccccgaccagaggccccgcccccactcctctctg
attcgtcagtccagttggagcggtctgtctgaaagctccagtcatgagtctctgacgggt
tcactggtgaagagcaacagtctgaacagcatgaagacatccactgacaagaagaagaag
tccgtcctccgtaacgaaggtaccaacggctgcggtgacggcgtctcccgtaaacctccg
atgggacgcagagacacatccaccccgcctccagcgccccccggcggtgtcctggttcgg
cggagtcaggtctgcctctccaccttctacaaagagtgtgcagagacggccgactccgag
ccggactgcagctgccagccggcagagagagacggcagacctgtaggaacgcgtgactcg
gccggcagtcataaggttgtagacgaaaactacaacaacgtctcctccccgagccgagga
ggcctggcagggaaactccagcagcttctcactccgaccaaaaaccgagtgtctgttcga
cgagccgccagcgtggacgaccggcgaggagggttaggacgaagactgtgtgaacagagg
cagtccaggaaagcccaagtggctgaaacactgctgaaagccaaggagaggctggtcacc
gctacctcagagagttcgttgtctgtaggaagtgacctcgacttggcggacacgcccagt
ccagcctatcctctgcgcaggtcctgggacgccaatcaagaggggacggggcttgaggtg
ttgatgtccagctgctcactgtgtcgcagctgtaactcgttggtttatgacgaggagatc
atggccggctggacgtcggacgactccaacctgaactcgtgctgcccgttctgctgcgcg
tccttcgtcccgttcctaaacgctgagatctgtgacctcggacccctcagcagcgcggag
cgcagcaactggaacgtggaggacgaggtggagagtgcagtcaggccccccagtggccag
gaagcctccctgcgacaccagtgtaacggtctgagtgaagactccagctccgagaccagc
agctactccgagaccagcagaacaaccacgggttcgtcaggggccggtgctccccaggtg
acggtggcctacctgagccccctggttctgaggaaggagctggagagtctgctggagaac
gagggcgaggcggtcctggcccagcctcagttcctggacaaccactccatcatcttctgg
aacctggtctggtacttccagcgcctcagcctgcccagtaacctgctgcagctggtcaga
gcctcgccactggtcagccagttcacgcagctggagaactcggcagtgagggtgaggctc
ctctgggacaccctgacccccgacacagaccagtggccccccctctacatcctctggagg
atccacagtggcgtcccgatgagaagctacagctggcggagacacaaccacccgttcact
ctgtccttcctggaggaggtgctgcggtgggtcggcatgaatgaggtgcacaaagcggtc
accctcttcctggacacgctggccaaacagccgggctccgcctggacacagaggagtttg
tacagagagttcctcttcctcacactggcagctatgggcaaagaccacgtcgctgcgttc
gataaaaagtacaaggcggcgtactctcggctcagcagcactctgggtcgagaggagctc
cataagaagcgagctcagcctcccagccccaaagccatcgactgcaggcgcagcttccac
ccgccactcgaatgctga
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