Siniperca chuatsi (mandarin fish): 122881894
Help
Entry
122881894 CDS
T08948
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122881894 (irx2a)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122881894 (irx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
122881894
NCBI-ProteinID:
XP_044064562
LinkDB
All DBs
Position
LG9:complement(19350409..19356103)
Genome browser
AA seq
520 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRNEDLARSSSGSAFSPYPGSAAFSASAGA
GFSSPLSYSTDPTTGFPSYMSSPYDAHTTGMAGALSYHPYGSPGYPYQLNDPAYRKNATR
DATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR
NKSEDEDEEDGDGERKEVERPEKTLDNSEASAEDEGISLHVDTLTDHSCSAESDGEKVSC
RVGELGSEQAGDKCDEDGEDQNHDPRVQLSPKPVTSSPLTGVEAPVLSHHQHRHHHHHLH
HLHHLHSQREDLARNLVNSNNINTNKSSSCIDSRPSSGPPQNPTVKPKLWSLAEIATSDQ
KQQHQQQHLGQPGQPNCPSSSGGLLTPPTPSTTSPAASSPSLYPAPSILGRPIYYTSPFY
SNYTNYGNFSPLQGQGILRYTNSSGVSLAAAAAAAAAAAAAAAAANEGLSSSHQALEAST
NPKHRPDSPLVKNNPNQIVVVEQQQQQHFRPANLEAKKGT
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctctggctctttattcgtgt
ccggcttacggggcctcggctctggctgccccgcgaaatgaagacttggccaggtcgtcc
tctggctcagccttcagcccttaccctggatcggctgctttctccgcctccgcgggtgca
ggcttctccagtccactgtcatactccacggatccaactacgggattcccatcttacatg
agctctccgtatgacgcgcacacaacgggcatggccggggcattaagttaccacccatac
gggagtccagggtacccctaccaactcaacgacccggcttaccgcaaaaacgccaccagg
gacgccacggccaccctgaaggcctggctgcaggagcacaggaagaacccgtacccgacg
aaaggggagaagatcatgctggccattatcactaagatgaccctgacgcaggtctccaca
tggttcgccaacgccaggcggaggctcaagaaggagaacaagatgacctgggcgcccagg
aataagagcgaagacgaggacgaggaggacggggacggagagaggaaagaggtggagcgc
cctgaaaaaacactggataacagcgaggcttcagcggaggatgaaggtatcagcctgcac
gtcgacactctgacagaccactcctgctcggcagagtctgacggggagaaggtcagctgt
cgtgtgggagagctgggctctgagcaggccggcgacaaatgcgacgaggacggcgaggac
cagaaccacgacccgcgggttcagctctcgcccaaacccgtcacctcgtcgcctcttacg
ggagtagaagcaccagttctcagtcatcaccaacaccgtcaccaccaccaccacctccat
catctacaccatctccacagccagcgcgaggatttggcccggaacctcgtcaacagcaac
aatattaataccaataaatcgtcttcatgcattgatagcagaccttcctcgggcccgcct
cagaaccctacagtcaagcccaaattgtggtcactggcggagattgctacctcggaccaa
aagcagcaacatcagcaacagcatctggggcagccagggcaaccaaattgcccctcttcc
agcggtggcctccttacgccccccacgccttccaccacctccccggctgccagttccccc
tccctctacccggccccctccattcttgggagacctatttattacacttctcccttttat
agcaattacacaaactatggcaacttcagccccctgcagggccaagggatcctgcggtac
actaactcatctggagtgagtctggctgctgctgcagcagcagccgccgccgctgccgcc
gccgctgctgctgcaaacgagggtctgagctcctctcatcaggctctggaggcgagcaca
aaccccaaacacaggccagactctcccctcgttaaaaataacccaaaccagattgttgtt
gttgagcagcagcagcagcagcatttcagacccgcaaatttagaagcaaagaaaggtacg
taa
DBGET
integrated database retrieval system
