Siniperca chuatsi (mandarin fish): 122881906
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Entry
122881906 CDS
T08948
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122881906 (irx1a)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122881906 (irx1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
122881906
NCBI-ProteinID:
XP_044064595
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Position
LG9:19495018..19499662
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AA seq
495 aa
AA seq
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MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGSTEIGGSPSATAAAVTSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKESPGVHPASFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGSRSKEDGEDVNLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDKSTEG
SRDHRGGVGAGGELDSLERRRAFALQAHEAFDKSKSTISVHPGSKENSDGNNNTRVLSPD
RPGSFPLPSNNKPKIWSLAETATSPDSSSQKPSSPCAPVATTHSSAPHHQIQTHPAFLPS
HGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHHHHNHHLPAQQQQQQPTSVVV
SPVAAAAALSNDSKAPPETHSPKHIDHENDVRSDSPPTQILKSSFRPIHDRSSLPSSARS
PQDATQRVLTALSSA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctaggctacccgcagtacttaagtgcctcccaggcggtatatggg
agcgagagaccgggagtgcttacgccttcgtcccggggagggagcaccgaaatcggggga
agtccgtccgccaccgcagcggcggtcacatcggtgttgggcatgtacgccaacccgtac
gcacacaactacagcgctttcttaccttacaccagcgcggacttggctcttttctcacaa
atgggatcccagtatgagctgaaggagagtcctggcgtccatcctgccagcttcgcagca
cacacatctccggccttctatccatacggccagtttcagtacggggacccggccaggccc
aagaacgccactcgggagagcaccagcaccctgaaagcctggctcaatgagcacaggaag
aacccgtacccgaccaagggggagaagatcatgctggccatcatcaccaaaatgacgctg
acgcaggtctccacctggttcgccaacgccaggaggaggctcaagaaggagaacaaggtg
acctggggaagcaggagcaaagaggacggggaggacgttaacttgttcggcagtggagac
gaggcggagaaaaacgaagacgaggaggagattgatttggagagcatagatatagacaaa
atcgacgacaacgacggggatcaaagcaacgaggatgatgacgataaatctacggaaggg
agcagggaccacaggggcggtgtcggtgcgggtggagaattggacagcttggagagaaga
cgggccttcgccctacaggcccatgaggcctttgacaaatctaagagcacaatttcagtt
cacccagggagtaaggagaactcggacggcaacaacaacacaagagttttgtccccggat
agacccgggagctttcctctcccgtctaacaataagcctaaaatatggtctttagcagag
accgctactagtcccgatagttcatctcagaaaccctcttccccttgtgccccagtggcc
accactcactcatcagcgccccaccaccagatccagacccacccggccttcctccccagt
catggactgtacacttgccagattggaaaattccacaactggacaaacggggctttcctg
ggccagaactccctgctgaatgtgaggtcgtttctgggagtaaaccagcaccatcaccac
caccacaaccaccacttgccggcccagcagcagcagcagcagccaacatcagtggtggtg
tcgccggtagcagctgcagcagcactcagcaatgacagcaaggccccaccagagacccac
agtcccaagcacatagaccatgaaaacgatgtaaggtctgattcacctccaacacagatc
ctgaagtcttcctttcgacccatccatgacagatcctctctgccttccagcgccaggagt
ccacaagacgccacgcaacgggtcctcacagctctctcctcggcttga
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