Siniperca chuatsi (mandarin fish): 122881911
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Entry
122881911 CDS
T08948
Symbol
gdf6a
Name
(RefSeq) growth/differentiation factor 6-A
KO
K20012
growth differentiation factor 6
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04060
Cytokine-cytokine receptor interaction
schu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122881911 (gdf6a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122881911 (gdf6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
schu04052
]
122881911 (gdf6a)
Cytokines and neuropeptides [BR:
schu04052
]
Cytokines
Transforming growth factors (RSTK binding)
122881911 (gdf6a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Herpes_IE2_3
NXPE4_C
Motif
Other DBs
NCBI-GeneID:
122881911
NCBI-ProteinID:
XP_044064601
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Position
LG9:complement(23685136..23692716)
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AA seq
440 aa
AA seq
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MDASRLVTLYLGLLLVFLGNIPCFQSAAIISPSAPRRNRGARIPHQDGQRSSKFLKDMFA
SSHPIAGHHKEDLKDAIVPHEYMLSIYRTYSAAEKLGLNASFFRSSKSANTITSFVDRGT
DDLLHSPLRRQKYLFDVSTLSDKEELVGAELRIFRRAPGDLQTSLQTTGLYDIQLYPCRS
DRLLDSRSLDPLDSTKGGWEVLDVWDMFKAHQHHYHHPHHHYQGNQLCFQLRVTLGKSET
EVDLRQLGLDRSSRSQREKAILVAYTRSKKRENLFNEMKEKIKSRRSVGEKEEAVVVKAA
AEEGVSPKGVKGEGPRRRRRTALSNRHGKRHGKKSKSRCSKKALHVNFKELGWDDWIIAP
LDYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPNSTPPSCCVPTKLSPISILYIDS
GNNVVYKQYEDMVVEQCGCR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatctcgactcgtaacgctatatctgggcctgctccttgttttccttgggaat
ataccgtgtttccagtctgctgctatcatctctccctctgcgccgaggagaaacagggga
gccaggatccctcatcaggacggacaaaggtcatccaaattcctaaaagacatgttcgcg
tcttcgcatcctatcgcgggccatcacaaagaagacctaaaggacgctattgtgccgcat
gaatacatgctctctatatacaggacatactcggctgcagagaagctcggactaaacgca
agctttttccgctcctctaaatctgccaacaccataacaagttttgtggacagaggaaca
gacgatcttttgcactctcctctgcgaagacaaaagtatctgtttgatgtctcaaccctt
tcagacaaagaggagctggtcggggcggaattaaggatatttaggagagcgcccggggat
ttgcagacttccctgcagacgacgggtctgtacgacatccagctctacccctgccgctcg
gacagactgctggactccaggtctctggacccgctggactccaccaagggcggctgggaa
gttttggacgtgtgggacatgtttaaagcacatcagcatcattaccatcatccccatcat
cactatcaggggaaccagctctgcttccagctccgcgtcactctcggcaaatcagagacc
gaggtggacctgaggcagctggggctggacaggagtagccggtcccagcgggagaaggcc
atcctggtggcctacacccgctccaagaagagggagaacctgttcaacgagatgaaggag
aagatcaagtcgcggaggtcggtcggtgagaaggaggaggcggtggtggtgaaggcggcg
gcggaggagggggtgtcgccgaagggggttaaaggagaggggcctcggcggcggcggagg
actgcgctgagcaaccggcacgggaagaggcacgggaagaaatccaaatccaggtgcagc
aaaaaggcgctgcatgtgaatttcaaagagctgggctgggacgactggatcatcgcgccc
ctggattacgaggcgtaccactgcgagggtgtgtgtgacttccccctgaggtcgcacctc
gagccgactaaccacgccatcatacagacgctcatgaactccatggaccccaacagcacc
ccgcccagctgctgcgtccccaccaaactcagccccatcagcatcctgtacatagactca
ggcaataacgtggtgtacaaacagtacgaggacatggtggtggagcagtgtgggtgcagg
tag
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