Siniperca chuatsi (mandarin fish): 122881997
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Entry
122881997 CDS
T08948
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04020
Calcium signaling pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122881997
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122881997
04082 Neuroactive ligand signaling
122881997
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122881997
Ion channels [BR:
schu04040
]
Ligand-gated channels
Glutamate (ionotropic)
122881997
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
122881997
NCBI-ProteinID:
XP_044064784
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Position
LG9:complement(12241698..12303611)
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AA seq
1961 aa
AA seq
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MVAIPTLSLLLVLAEWAGLVDASPHLLLRPSPRERDAGAMMNFNIAVIHAGATVQAEAAV
AGPGGRVLYPGFGRVYGSLGESVVTQWGSANVIWLQVNDSSPKTVLSQLCELLAARPLQG
LVYEEERPPRTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLGRMPQESGSIFLQFSSSTAL
QLEVIFEVLEEYDWTAFSVVSTRHHGYQDFLSVVEGLTDGSFIGWEKKSVVILNVTDDPG
GSRTRRLLKENEAQVRLLYCSQEEAELVFRAAWAAGQAGASHMWFAVGPALSGLGMENLP
RALFAVRPQGWRDEPRRRIARGVSVLTHGAVAMRKDYGTTGGPNFVTNCMTDANQTQRLR
GRMRYFSNITLGGRDYSFNGDGYLSNPFLDVISWTPGRGWEDVGWWENGVLRLRYPAWSR
YGPFLKPPDDAQHLRVVTLEERPFVIVELADPASGTCIRDSVPCRRPLNASAIHEGVAPM
KQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMIGEVVYKRADMAIGSL
TINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVT
VFIFEFFSPVGYNRSLETGKKAGGSTFTIGKSVWLLWAIVFNNSVPVENPRGTTSKIMVL
IWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPEEQYPPLKFGTVPNGSTEK
NIRSNYPDMHQYMGKYNQRGVEDAILNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGS
GKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSKL
DIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCMATSSGKLDFLLAISRGMYSCCSF
EDETAPGGAKSLPTHHHSTMVTVPSQPHVVPTSMTNPAIVMAQQQPPPQQQQPQPVYKTP
LPGSPPTVVHSGTALGPSNTPIAGAPLPCSTFLPRPDRRLAVVDRWRLPKSATATNPMAV
RGAITDMGPFAQKVPPNWASTTGGGGGLDGYKRYYGPIDPEGLGPCMEQQAGSQTPKTMP
RGHPQPPPASVAFYSEKGMDHGVGKRVVGGGSGGQGKGAIKPLGTPRLPPKSQAPLPPTP
PLPHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGGARDGVREGGGRRARPLSPP
LSLPVPVPLSPSYTPPSPSASLHYTSSFSSSTTSSTSTSSSASSSRSTSPTYSYSSSRST
RDRTGGIDGEDDDDDEELTEESSLLLGRGRERERSIIRPRSFSHGRLPPPIPPRKPRTSW
GDRERERERERGGSQLSQLQEWWASWSERERSGAGGDAERQKREKKRRKEKEKEKKKKKK
NKKRKKREERERERERERKRRKVKKKKKKALKTKKRKKSTGGRRSEPEEGDVEPEREGEA
EGEREGGIQDFSSFSAQYRSTFGEKGRDSWEGERERGRREGGDEGNDREQEDGSRSRERR
PKTSRPHSRHHTPNKRYPNLNKLPASVKFWVNGKGDDSNTPPTSLHPLLPSSKRRRSGGI
DREDSGRLGERRPLLMHYEKEKAQTREGLSFHEWDSEDDEDDDDDEEEEERERVRERGEE
RGRRAGRGAVSESERDRARAEDSYSDEGSSGEFGRFERYWEGGAGGSSTGIGGIGGGGWF
FGTYPSREKGGSINSRDDSLLGTRAEGWIGADFWGSGPGVGWGSGGGSGGLGSQWPPPPA
AFPPPRRYWSMDKIPVKGEKKWKSGGGKSKGRARDRGEEAGRATICSCSLYPQPHPYPHP
HSRSHTSHSKRGATALSHSQEELLPHCHSFSGVSRPKPLPPKPDPNQAKSGSQSNLSLST
QPTDHPPQPSPSPTQQPSMSPTSLPMPIPPPPSSSSVSPPAGVGMAGQSQAQASASAKLQ
YQRLRSVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccatacctactctctctctcctattggtcctggcagagtgggcaggtctggtg
gacgcctccccccacctcctgctccggcccagcccacgggagcgtgatgcaggggccatg
atgaacttcaacatcgccgtgatccacgctggtgctacggtgcaggcggaggcggcggtg
gcggggcctgggggaagggtgctctaccccggctttggccgggtatacggctccctgggg
gagagcgtggtcacccagtggggctctgctaacgtcatctggctacaggtgaacgacagt
agtcctaagacggtgctgtcccagctgtgtgagttgcttgcggcgcggcccctgcagggt
ctggtttatgaagaggagaggccccctcgcacggcctggggtcctttggcccccatgctg
gagtttgtctctgcgcaaacaggactgcccatagtggctgtaggagggggagcggggctg
gggaggatgccacaggaatcaggttccatctttctccagttcagctcctctactgccctc
caattagaggtcatctttgaggtgctggaggagtatgattggacagccttttccgtggtg
tccacgcgtcaccatggctaccaggatttcctgtctgtggtggagggcctgacggatggc
tcgttcattggctgggagaagaagagtgtggtgatcctgaacgtgaccgacgaccctggg
gggtcacgcacacgcaggctgctgaaggagaatgaggcgcaggtacgtttgctgtactgc
tcccaagaggaggccgagctggtcttccgagctgcctgggccgccggtcaggccggagcc
tcgcacatgtggtttgctgtggggccagctctctcaggtttgggcatggagaacctgccc
cgggctctgtttgccgtacggccccagggctggagggacgaacctcgccggaggattgct
cggggtgtgtctgtgttgactcatggggcagtggcgatgcgcaaagattacggaaccacg
ggtgggccaaactttgtcaccaactgcatgacggatgccaatcagactcagagactgcgg
ggcaggatgaggtatttcagcaacatcacgcttggcggtcgagactactccttcaatggt
gacggttacctgtccaaccccttcctggatgtaatttcctggacacctggacgtggatgg
gaagatgtaggttggtgggagaacggtgtgctgaggcttcggtacccagcctggtcccgc
tatgggccattccttaaaccacctgatgatgcccagcacctgcgtgttgtcacactggag
gaaaggccatttgtcattgtggagctggcagaccccgcatccgggacctgcatccgtgac
tcagtgccctgcagacgaccccttaatgccagtgccatccatgagggtgtggctcccatg
aagcagtgctgcaagggcttctgcattgacatcctcaagagattggccaagattgttggc
ttcacctatgacctttacttagtgaccaatgggaaacatgggaagaaaattgatggggtt
tggaacggcatgattggagaggtggtatacaagcgagcggacatggccattggctcactg
actatcaatgaggagagatcggaggtcgtagatttctctgtcccatttgtggagacgggg
atcagtgtaatggtctctcgtagcaacggaactgtatcaccatctgctttcttagagccc
tacagtccagcggtgtgggtgatgatgttcgtcatgtgcctgaccgtggtggctgtgacc
gtcttcatttttgagttcttcagccctgtgggctacaaccgcagtctcgagactggcaag
aaagctggagggtctacttttactataggaaaatctgtatggcttttgtgggccattgtc
ttcaacaactctgtgccagtggagaaccccagaggaaccaccagcaagatcatggtgctc
atctgggccttctttgctgtcatctttctggcctcctacactgctaacttggctgccttc
atgatccaggaggagtacattgacacagtgtcaggcctctcggacaagaagtttcagcat
cccgaggagcagtacccacctctgaagtttggcacggtgcccaacgggagcacagaaaaa
aacatccgctccaactatccagacatgcaccagtacatgggcaaatacaaccagagagga
gtggaggacgccatactgaacctcaagaccgggaaactggatgcttttatttatgatgct
gcagtattgaactatatggccaggaaggacgaaggttgtaaggtgatgaccataggctcg
gggaaggtttttgccaccacaggctacggtatcgccctgcacaaaaactcacgctggaaa
cgtcctcttgacctggccctgctgcagctggtgggagatgatgagattgaaatgctggag
cgcctctggctgtctggtatctgccataatgacaaaattgaggtgatgagcagtaaactg
gatattgacaacatggccggggtcttctacatgctgctggtggctatgggcctcagtctg
ctggtgtttgcctgggagcacttggtctactggaagctgcgccactgcatggccaccagt
tctggcaaactggactttctcctggcaatcagcaggggcatgtatagctgctgtagcttt
gaagatgaaacagcgccaggtggagctaaatctttgcctactcatcaccacagtacaatg
gttacagtcccatcccagccacatgttgtcccaacatctatgaccaacccagccattgtc
atggcgcaacagcagccaccaccgcaacagcagcaaccgcagcccgtctacaaaacacct
ctaccgggctctcctcccaccgtggtgcattctgggacagcactgggtccctccaacacc
cccattgctggtgcacccctcccttgctccaccttcctgccccggccagaccgcagactg
gctgtggtggatcgatggaggctgcccaaatctgctacagccaccaacccaatggctgta
aggggggccatcactgacatgggaccctttgcacagaaagtcccaccaaactgggcttca
actactggagggggtgggggacttgatggttataagaggtactatggtcccattgaccct
gagggactggggccctgcatggagcagcaggcagggtcccagacccccaagactatgccc
aggggccacccccaaccccctccagctagtgtggccttctactcagagaagggcatggac
cacggggtggggaagagggtggtgggaggtggcagcggaggtcaggggaaaggggccatt
aaacctctgggcactcccagactgcctcctaagagtcaggctcctctgcctcctacacct
ccgctgccacacccctctccccctctcccctcatccttctggaggaagcgcaggcccaaa
aagcccaaagagcctggagggccactatatgagaacattctacccctggggcggagggga
ggagcacgagatggagtgagggagggaggagggaggagggcacgccccctctctcccccg
ctctcacttcctgtgccagttcccctcagcccctcttacacccctccttctccctctgca
tccttgcactatacgtcctcgttctcttcgtcgaccacctcatccacatccacgtcctca
tctgcctcatcttctcgctccacctctcccacctactcttacagctcctccaggagcaca
cgagacaggactggaggaatagatggagaggatgatgatgatgatgaggagctgacggaa
gagtcaagcctcctccttggcagggggagggagagggaacgctcaatcatccggcctcgt
tccttcagccacgggcgcctgccaccacccataccccccaggaaaccacgcacatcctgg
ggtgatagagaaagggaaagagagagggagagagggggaagccaattgtctcagctccaa
gagtggtgggcaagctggagtgagagagagaggagtggagctggtggagatgctgagagg
caaaaaagggaaaagaagaggagaaaagagaaggagaaagagaagaagaagaagaaaaag
aataaaaagaggaaaaagagggaagaaagggaaagagagcgagagcgagaaaggaagcgg
cgaaaggtgaaaaagaagaagaagaaggcgctgaagacaaagaaaagaaagaaatcaact
gggggaagacgctctgagccagaggagggagatgtagagccagagagggaaggagaggca
gaaggagagagggaaggaggaatacaagacttctcttccttctctgcccagtatcggagc
acatttggggagaaggggcgggattcatgggaaggagagagggagagaggtaggagagaa
ggaggagacgagggcaatgatagggaacaggaggatggcagcagaagcagggagaggcgt
cccaaaacctcacgtcctcattccagacatcatacccccaataagcgctatcctaacctc
aacaaactccctgcatcagtcaaattttgggtgaatggaaaaggtgatgattctaatact
cctccaacatccctccacccactccttccatcctccaagcggagaagaagtggagggatt
gacagagaagacagtggtagactcggagagcggcgtcctttgttaatgcattatgaaaaa
gagaaagcacagacaagagaagggctgtccttccatgagtgggactctgaggatgacgag
gatgatgatgatgatgaggaagaggaagagagggagagagtgagggagcggggggaggag
agaggaaggagagcaggtaggggggcagtgtctgagtcagagagggacagggccagggca
gaggacagttattcagatgagggctcgtcaggggagttcggacgttttgaaagatactgg
gaaggaggtgcaggggggagcagcactggaatagggggcataggtggaggaggctggttt
tttggcacctacccctccagagagaaagggggcagtatcaacagtcgggatgattcctta
ctaggaactcgggcagagggatggattggtgctgatttctggggttcagggccaggagta
ggttggggatcagggggagggagtggagggcttggctcgcagtggccgccaccccccgca
gccttccctcctcctagaagatactggtctatggacaagatccctgtgaagggagagaaa
aagtggaagagtggaggagggaagagcaaggggcgagctagggacagaggggaagaagca
ggaagggccaccatttgttcctgtagcctttaccctcaaccccatccttacccacatccc
cacagccgctcgcacacctcccactccaagagaggagccacagcactttcccatagccag
gaagagcttctcccccactgccacagcttcagcggggtttctcgccccaagcctctgccc
cccaaaccagatcccaatcaggccaaatcaggcagccaatctaacctcagcctcagcaca
caacccacagaccatccaccacagccctcaccgtcgccaacccagcagccgtccatgtct
cccacctccctcccgatgcccatcccgcctccgccctcctcatcctccgtctcaccacca
gcaggggtagggatggcaggccagagccaggctcaggcttcggccagtgccaaactccag
tatcagagactgcgctcggtgccacagccacggaggttctactccccccacctgccactc
aaagccaagagcctgtgctcacgccgagggtcggcccacttctccagcctggagagcgag
gtatga
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