Siniperca chuatsi (mandarin fish): 122882002
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Entry
122882002 CDS
T08948
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122882002 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
schu01007
]
122882002 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schu03016
]
122882002 (vars1)
Enzymes [BR:
schu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
122882002 (vars1)
Amino acid related enzymes [BR:
schu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122882002 (vars1)
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122882002 (vars1)
Prokaryotic type
122882002 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
GST_C_3
tRNA-synt_1e
Jag_N
GST_C_7
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
122882002
NCBI-ProteinID:
XP_044064796
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All DBs
Position
LG9:complement(11211827..11224177)
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AA seq
1276 aa
AA seq
DB search
MATLYVSPHPDDFRSLLALITAEFCPSCSRTLTDDPPASLNACSRPTLVLGAGEGDSVLS
GASAVAWYLALQGKRAGVDIKQQSQVWQWLSFADNELTPVSCAVVFPLMGVMGMDKKLQQ
SSRAELMRVLKVLDQTLEPRTFLVGESITLADMAVATAVLLPFKYVLEPSDRKVLTNVTR
WFTTCINQPQFLKVLGKITLCEKMVPVTPKTNAAANAKAANANPVVDSADATANGPPKTE
AQLKKEAKKREKLEKFQQKKEMEAKKKTQPPTEKKAKPEKKELGVITYNIPTAPGEKKDV
ISPLPDSYSPQYVEAAWYPWWEKQGFFKPEYGRKSISDQNHRGIFMMCIPPPNVTGSLHL
GHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMREKGMSRHDLGRENF
IQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRMHDEGVIYRSK
RLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKVDGSDEEVIVA
TTRIETMLGDTAVAVHPADSRYQHLKGKMVLHPFCDRKMPIVFDDFVDMSFGTGAVKITP
AHDHNDYEVGERHNLAFINILDENGLLINVPPPFLGMKRFEARKAVLQALKDRSQFKEIK
DNPMVVPVCSRSKDIVEPLLKPQWYVSCTDMGKQAADAVREGQLKIIPDHHLKTWFNWMD
NIRDWCISRQLWWGHRIPAYFVTVNDPSVKPGEDMDGHYWVSGRSEEEAREKAAKRFNVS
VDKITLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLNVFYPGTLLETGHDILFFWVARMV
MMGLQLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHVQLMDSNL
DPLEVEKAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLW
NAVKFAMKTLGDNFVPSEKAQLCGEESVSDRWILSRLSAAVGLCDAGFKAYDFPAITTAI
YNFWLYELCDVYLESVKPVFSKAEEDSTSQRQALVCRQTLYTCLEVGLRLLSPMMPFVSE
ELYQRLPRRRPHSDPPSISVTSYPDTEEFCWHSEEVDRDMDFIMTVVKTIRSLRADYNLT
KTRADCYLQCIDSATVSLVQKYSLQIQTLSYSQAVIPLTANQPVPEGCAVAIASDRCTVN
LMLKGLIDVEKEVAKLITKKGDLEKQMEKLREKIAKSDYKEKVPVKVQEQDAEKLRQSQT
ELEKVKEAMDNFRKMM
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggccactctctacgtttcccctcaccctgatgacttcaggagccttctggctctcata
actgcagagttttgtccatcctgctcgaggaccctcacagatgaccctcctgcgtccctg
aatgcctgctccagaccgaccctggtgctgggtgctggggaaggtgactccgtcctcagt
ggggccagcgctgtggcctggtacctggccttacaggggaagagggctggtgtagatata
aagcagcagagccaggtctggcagtggctcagctttgcagacaatgaactcaccccggtg
tcctgtgctgtggttttcccactcatgggggtgatgggaatggataagaagctccagcag
agttcccgcgcggagttgatgcgtgttctaaaggttctcgatcagacactggaaccgaga
accttcttggtgggggagagcatcaccctggctgatatggctgtagctacagctgttctt
ctaccttttaaatatgtgttagagccatcagacaggaaggtcttgaccaatgttaccagg
tggttcacgacctgcataaaccagccacagttcctgaaggtgttggggaagatcactctt
tgtgagaagatggtgccagttacaccgaagacaaatgctgctgcaaatgctaaagctgct
aatgccaatcctgttgttgattctgccgatgccacagctaatggcccaccaaagacagaa
gcccagctgaagaaggaagctaagaagagagaaaagctggaaaagttccagcagaagaag
gaaatggaggcaaagaaaaaaacgcagccaccgacagagaaaaaggccaaaccagaaaag
aaggaattgggagtgatcacatacaatatccccactgctcctggggagaaaaaagatgtc
attagtccgcttcctgactcttacagtcctcagtatgtggaggctgcctggtatccatgg
tgggagaagcagggattcttcaagcctgagtatgggaggaagagtattagtgaccagaac
catcgtggcatcttcatgatgtgtatccctccacctaatgtgactggatcactccacctg
ggtcatgccctcaccaacgccattcaggattctctgaccagatggcaccggatgcgaggt
gagaccaccttgtggaacccgggctgtgatcacgctggtatcgccacccaggtggtggtg
gaaaaaaagctgatgagagagaagggtatgagtcgtcacgatctgggcagggagaacttc
atccaggaagtctggaaatggaagaacgagaagggagaccgtatctaccaccagcttaag
aagctcggctcttctctggactgggacagagcctgcttcactatggaccctaaactttcc
tatgcagtccaagaggcctttatccgcatgcatgatgagggagtgatctacaggagcaag
aggctggtcaactggtcctgcacactaaactctgccatctctgacatagaggtggataag
aaggagctcactggcaggactctgttgcccgtgcctggttacaaagagaaagtggagttt
ggagtgttggtgtcttttgcctacaaggtggatggatcagacgaggaagtaattgtagca
acaactcgtattgaaactatgctgggagacactgctgtagctgtccaccctgctgactcc
agatatcagcatctgaagggaaaaatggtgctgcaccccttctgtgaccgcaagatgcca
attgtctttgatgactttgtggacatgagctttggaacaggtgctgtcaaaatcacccca
gcccatgaccataatgactatgaggttggagagagacacaatctggccttcatcaacatc
ttggatgagaatggcctgctcattaacgtgcctcctcccttcctgggcatgaagcgtttt
gaggccaggaaggcagtgcttcaggctctcaaggacagaagccagtttaaagagatcaaa
gacaaccctatggttgtcccagtctgcagtcgctccaaggacattgtggagccgctgctg
aagccgcagtggtatgtgagctgcacagacatgggcaagcaggccgcagatgctgtcaga
gagggacagctcaaaatcatccctgatcaccacctcaagacgtggttcaactggatggac
aacatcagggattggtgtatctctcggcagctgtggtggggtcatcgtattcctgcttac
ttcgtcactgtcaacgatccctctgtgaaaccaggagaggacatggatggtcattactgg
gtgagtgggagatcggaggaggaggccagagagaaggcagcaaaacgcttcaatgtgtct
gtggacaaaattaccctcagacaggatgaggatgttctggacacttggttctcgtctggc
attttccctttctccatctttggatggcctaatgagacacaggacctgaatgtgttctac
cctggcaccctgctagaaacgggccatgacatcctgttcttttgggttgctcgtatggtg
atgatgggcctccaactgactggcaagctgcccttcaaagaggtttatctgcatgcagtg
gtgagggacgcccacggacgaaagatgagcaaatctctgggcaacgtcattgaccctctg
gacgtcattacagggatctcactagagggtctgcatgtccagttgatggacagcaacttg
gatccactggaggtggagaaggcaaagcagggccagaagtcagactacccaaatggcatc
ccagagtgtggcacagatgctctccggttcgccctgtgtgcctacactagccaaggtagg
gatatcaacctggatgtcaaccgcatcctgggttaccgtcacttctgcaacaaactgtgg
aatgctgtgaagtttgccatgaagacgctgggagacaactttgtaccatcagagaaagcc
cagttgtgtggagaggagagcgtatcagacaggtggattctgtctagactgagtgctgct
gttggtctctgtgacgctggcttcaaggcctacgacttcccagccatcacgaccgccatc
tacaacttctggctgtatgagctctgtgatgtctacctggaaagtgtgaaaccagtgttc
agtaaagcagaggaagacagcaccagccagagacaggccctggtgtgcagacagaccctt
tacacctgtttagaagtcggtctgcgccttctgtctcccatgatgcccttcgtctctgag
gaactctaccagaggttaccacgacgacgacctcatagcgatccccccagcatcagtgtc
acatcttaccctgacacagaggagttctgctggcacagtgaggaggtcgaccgtgacatg
gacttcataatgactgtggtcaagacgatcaggtcactgagggccgactacaacctgacc
aagaccagagctgactgttacctccagtgcatagactctgcgaccgtgtccctggtgcag
aagtacagtctgcagattcagaccttgtcttattctcaggccgtcattcctctgactgcc
aaccagcctgtcccagaaggctgtgctgtggctatcgcctctgacagatgtactgtcaac
cttatgctcaagggtctcattgatgtggagaaagaagtggctaagcttattacaaagaaa
ggtgacctggagaaacagatggagaaactgagagagaagatagcaaagagtgactacaag
gagaaggtgccagtgaaggtgcaggagcaggatgctgagaagctacggcagagccaaact
gaacttgaaaaagtaaaagaagccatggacaacttcaggaaaatgatgtaa
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