Siniperca chuatsi (mandarin fish): 122882011
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Entry
122882011 CDS
T08948
Symbol
clstn3
Name
(RefSeq) calsyntenin-3 isoform X1
KO
K22661
calsyntenin 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122882011 (clstn3)
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Cadherin related
122882011 (clstn3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
DUF5570
Motif
Other DBs
NCBI-GeneID:
122882011
NCBI-ProteinID:
XP_044064825
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All DBs
Position
LG9:complement(11466933..11488673)
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AA seq
956 aa
AA seq
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MDRMNFLSFFLLCLTSVASGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPSGSGSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGVNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPNVPFAIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWIGWTKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSNHVAV
VPDSVVSALSGDHFTLQLWMRRGGANIQATTTQTRGNRKEEETIVCSTVKNDDSFSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAL
IHDNGAIPNPAPRQRMFIGACWEPEEKQKEILNNTIPEGKDSVKYVGGYHGLLSGVTVRP
GSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLTTSLRCFNEESCLSLKQLEGYLVVLQPDAPQISLSGVGPHLAR
PAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
NPEREELLVDMDVVRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSARFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHAGELSGHTLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGARGGAKEGSSQWDDSALT
IIVNPMESYESRMGISADTEGEGEEDEEVAESPDEASDDQRIIIKKEGRDGNARRY
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgaattttctctccttcttcctcctttgcttgacttcggttgccagtggc
aacaaagccaataagcacaagccatggatcgagacagagtaccaggggattgtcatggag
aacgacaacaccgtgctgctcaatccccctctctttgccctggacaaagatgctccacta
cactacgccggtgaaatctgtggcttccgggttcataatggcccctcgggttcaggttcg
gtccagttcgaagcggtggttctggaccgctccactggcgagggtctggtccggtccaag
gagccgctggactgtgagagccagcgggagcacagcttcaccatccaggcctacgactgc
ggagagggacctgacggagtcaacagcaagaaatcccacaaggccaccgtgcatgttcgt
gtaaacgacgtcaatgagttctcccccgtgttcgttgagcgtcgctacgaggcttcagtc
ccagaagggcgtctgtttgaccgaatcgtgcgtgtggaggctctggatgccgactgctcc
ccgcagtacagccagatttgcttctatgacatcatcactcccaatgtgcccttcgctatt
gacaacgatggtaacattaagaacacagagccattggattcgaagcgtcagcgcgttcac
accttctgggtgaccgccttcgactgtggaaagaaccgcgctcaggctgacgcccaggtt
gttgtcacggtcaagccgtcctgcaaacccggctggatcggatggaccaagcgtgtagag
tacacacctgggtcaggtagcatccccctgttccctagcttgcatctggagacctgcgaa
gagactgtgtggaacatccaggccaccgtagagctccagaccggccacatcgggaagggc
tgcgacagagacagctactctgacagatctgtgcgacgactgtgtggtgctgtcaggggt
gaagtagacctcctcccacctccatctcctgctgccaattggacatcagctctgcccact
ctcccctcttctgattcatctctggtcttctcattcaacggatccaaccacgtcgccgtg
gtgccggattcagttgtctctgcattatcaggtgaccacttcaccctgcagctgtggatg
cgaaggggtggcgccaacatccaggctacgaccacacagaccagaggaaatcgcaaggag
gaggagactattgtgtgcagcaccgtcaagaacgatgactccttctcccactattccctc
tccgtccatggctgccgcctctctctcttctactggcccgacgtatcagctgcacggccc
gtcaagttcttgtggaaactggagcaggtgtgtgacagcgagtggcatcatctttcactc
agcgtccagttcccctcagtgaccctgtatgtcgatggtgtgaccttcgaccccgccctc
atccatgacaacggagccatccccaaccctgccccccgccagaggatgtttattggcgcc
tgctgggagcccgaagagaagcagaaggagatactaaacaacaccatcccagagggtaaa
gactcagtgaagtatgtgggcggttaccacggcctgttgtcgggggtgacggtgcgtccc
ggcagcgtggagcctcacagtgtggtggagtgtctgtacgcctgcagggagggcctggac
ttcggagacctggagactctgggctctggcatgaaggttcatgtgaaccccagccagtca
gtgttagtgctggagggagacgacattgagagctttaaccgtgcagtgcagcaggtcacc
tacagaaactctctacgcttcgccacccctggtgtccgacccctcaaactaaccacctca
ctcagatgtttcaacgaggagagctgcctgtccctcaagcagctggaaggatacctggtg
gttctccagcccgacgcccctcagatctctctgtctggtgtcggccctcatctggctcgt
cctgcccctgagtttgaaggtccccgtggtgtcccccttttccctgagctccggattgtc
tgttccttgtctcatgctgtcaacacggctgcacaggggatggagggtggagctctgatg
tctgacgccgtagctcacactttagacggctgtgaggtccaaccactgggggaggagcta
aacccagagagggaggagcttctggtggacatggatgttgtgcgagagaggggactggaa
atcatcaatactactgcttatattgccatcacaggtgccgaatccatctctgtgtacgag
gacgtccttcgctcagtccgctaccgactggccaaaggctcagcccgctttgagaggcgg
ttccgcttgtcctgctctgagatgaatggcagatacaccagcaatgagttgactctggag
gtgaacttcctccactctctggacagtctgtaccacccatcccacctgctggcttcccag
cagcagtttctccatccatcccaccatgctggagagctgagtggacacaccctccccaat
ccacaccgcaactcagtggtgccaggagcagccaccgtcatcataatggtgtgtgtgggt
ttcctggttgtcatggtgatcctcggtgtgttccgaattcgctccatccatcgccgtggt
gaaggtgccagaggcggggctaaggagggtagcagccaatgggacgactctgccctcacc
atcatcgtcaaccctatggagtcctatgaatctcgtatgggcatctctgctgacacggag
ggggagggggaggaggatgaggaggtagcagagtcacccgacgaagccagtgacgaccag
cgaatcatcatcaagaaggaggggagggacggcaacgcccgtcgctactga
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