Siniperca chuatsi (mandarin fish): 122882015
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Entry
122882015 CDS
T08948
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schu03009
]
122882015 (nop2)
Enzymes [BR:
schu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
122882015 (nop2)
Ribosome biogenesis [BR:
schu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122882015 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
Motif
Other DBs
NCBI-GeneID:
122882015
NCBI-ProteinID:
XP_044064833
LinkDB
All DBs
Position
LG9:complement(11784737..11791437)
Genome browser
AA seq
766 aa
AA seq
DB search
MGRKLDPTNKVKRGPGKKARKQKGAETELAKFINDEETGLKRLSSRSRKRAAKRVQNLKK
PKDAAEEQPKKGFTDENSKWLTPAKRKRKIDEPESEDDSDEHWEEDEEEEQQEQQPKKGG
KDQGKKSTKLGVKEVEEEAADDNEEEADDDDDDDDEELVDDYGTLDDGSGEEAAEEESDG
EELLPIERAAKKAKKLKETMALGSDDDDEEDDDDDEEEKKSDADMDDEDTVQTNIDEMDQ
FRLPGAEESAKEGVLPLDLKTIHQRIKDNIDVLCNFSTKREEGKERAEYISLLKKDLCTY
YSYNIFLIEKLMDLFPLSELVDFLEANEIQRPVTIRTNTLKTRRRDLAQALINRGVNLDP
LGKWSKVGLVIYDSSVPVGATPEYLSGQYMLQGASSFLPVMALSPQEGELVLDMSSAPGG
KTTYIAQLMRNTGVIVANDANAERLKSVVGNIHRLGVTNTVVCNYDGRQFPKVMGGFDRV
LLDAPCSGTGVIAKDPAVKTSKDEADIHRSAHLQKELILSAIDSVNAESPTGGYLVYCTC
SIMVEENEWVVDYALKKRNVKLVPTGHDFGKEGFTRFKERRFHPSLRLSRRFYPHSHNMD
GFFVAKLKKFSNVIPTAPAGKEEENADASEATAVTNSPEEKPSKSDKTKQIVPSKAGSLN
KKNQANGTAAKKTANIKPKGKQDLLTGPKKAKVAKMDGETVKGAKAKKPAVKTADETKAS
KADKKEGSRFEKKQGKKRKTPKTAKNRIGKNKFRKLKHMLEKQDGE
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagttggatcccaccaacaaggtgaagagagggccagggaaaaaagccagg
aagcagaaaggagcagagaccgagttggccaagttcataaatgatgaggaaacaggacta
aaacgtctgtcaagtagatccaggaaaagagctgcaaaaagagtccagaatttgaaaaag
cctaaagatgctgctgaagaacagcccaagaaaggattcactgatgagaacagtaaatgg
ttgacaccagcaaagaggaagcgtaaaattgatgaacctgaaagtgaggatgacagtgat
gagcactgggaggaagatgaggaggaggagcagcaggagcagcagccgaagaagggagga
aaagaccaaggaaagaagagtactaaattaggagtgaaagaagtggaggaggaggccgct
gatgacaacgaggaggaggccgacgatgatgatgacgatgatgatgaagaattggttgac
gactatggtacactcgatgacggcagtggtgaggaagcagctgaagaagaaagtgatgga
gaggaacttcttcccatcgaacgagcagcaaagaaagcaaaaaagctgaaggaaaccatg
gctctagggagtgatgacgatgatgaggaagacgacgatgatgatgaagaggaaaagaaa
tcagatgctgacatggatgatgaagacacagtacaaaccaacatagatgaaatggatcag
tttaggctacctggggcagaggaaagtgcgaaggaaggtgttctgcctctagacctgaag
acaatccatcaaagaataaaggacaacattgatgtcctttgtaatttctcaacaaaaaga
gaggaggggaaagagagagcagagtacatctctcttctaaagaaggatctctgtacctat
tacagctacaacatcttcctcattgagaaattaatggacctcttccctctttcagagctg
gttgatttccttgaggccaatgaaattcagagacctgtcactattcggacaaatacactg
aaaaccaggaggcgggaccttgcgcaggccttgatcaacagaggagtgaaccttgatcca
ttggggaaatggtctaaagtaggtttggtcatctatgactcctcagtacctgtaggtgca
accccagagtatctgtctggtcagtacatgctgcaaggagcctccagttttctgccagtc
atggcgctctctccacaggagggagagttggtgttggacatgagctcagctccaggaggc
aagaccacctatattgctcagctgatgagaaacacaggggtgatcgtggctaatgacgcc
aacgctgaaagattaaagagtgtggtgggcaacatccaccgtctgggggtcacaaacact
gttgtctgcaactatgatggaaggcagttcccgaaggtaatgggtgggtttgatagagtg
ctgcttgatgctccgtgctcaggcacaggagttatcgctaaagatccagctgtgaagacc
agtaaggacgaggcagacatccatcgctctgctcacttgcagaaagaactgattctatct
gccatcgactctgtcaatgctgagtcccctacgggaggatatctggtctactgcacatgt
tcaataatggtggaggagaatgaatgggtggtggactacgctttaaagaaaaggaacgtc
aaattagttcccacaggacatgactttggcaaggaaggcttcaccaggttcaaagagcgt
agattccatccttctctgcgtctgtctcggcgattttacccacattcccacaacatggat
ggtttttttgtggccaagctgaagaaattctccaatgtaattccaactgcaccagcagga
aaagaagaagaaaacgcagatgcttctgaggcgacagccgttacaaactctcctgaagag
aaaccatccaaaagtgacaagacaaagcagattgtccccagcaaggcaggcagcttaaac
aaaaaaaaccaagccaatggaacagcagccaagaaaacggcaaacatcaagccaaaaggc
aaacaggacttactcactggaccaaaaaaggcaaaggtcgccaagatggatggagagact
gtgaaaggggcaaaggccaagaagcccgcagtgaagacagctgatgaaactaaagcatca
aaggctgacaaaaaggaagggagcagatttgagaaaaagcagggcaaaaagagaaaaaca
cccaagacggcaaagaacagaattggaaagaataaatttagaaagttgaagcacatgttg
gaaaaacaagacggagagtga
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