Siniperca chuatsi (mandarin fish): 122882016
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Entry
122882016 CDS
T08948
Symbol
pou2f2a
Name
(RefSeq) POU domain, class 2, transcription factor 2 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122882016 (pou2f2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122882016 (pou2f2a)
03021 Transcription machinery [BR:
schu03021
]
122882016 (pou2f2a)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122882016 (pou2f2a)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
122882016 (pou2f2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Presenilin
Motif
Other DBs
NCBI-GeneID:
122882016
NCBI-ProteinID:
XP_044064834
LinkDB
All DBs
Position
LG9:complement(10978471..11044629)
Genome browser
AA seq
735 aa
AA seq
DB search
MFVPLPVPFVFQRTAPDLNAWRLKSPLAPRSNSDIRMSKALEVEKVGADSPLEGTDSERN
GPESNHQAQSMKVNPFPLSPTLSSSKNKMEECGEMSPALSHGPTPSQTALQHTQLMLTGS
QLAGLTALLPAQQQLLLQQAQAQLLAAAVQQSSAAHAAHAAHAAAQANQQAQAAAAANQQ
AQQQQTGQTGQQAQSQSQRQGQSTQEQTAQSVPVPPPPPQLTLSQPIQLTAQDIQQLLQL
QQLVLVPGHPLPSPAQFLLPQAQQGQQGLLSTPNLIPLPQQNQGSLLSAPTRMGLQAQRD
KSMEVSGGGGMTTVSSVTSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYG
NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSIDSTLPSPSSLSSSSLGFDGV
PGRRRKKRTSIETNVRVALERAFMTNQKPTSEEILLIAEQLNMEKEVIRVWFCNRRQKEK
RINPSSATPPLPSQPPTAPPTHKQPCYSPHMMSSQLSQAVTSLSTTVTTMSPVCPLTSSL
TSTHPSLSSAPSPVTPPPPPRSTASPATPSHSTLNLNTGLWRMGKKNGDVSNYITDFAAN
LRNTVMGVNTGMNQALLGNNPLATIQALAASGGQLPLSSLEGGSKVMLGASGCQGGGLPS
SLFLNHPALLHMGQNPGAGLISAAIAKASQPSPFPLASSISPTPCSPSPCSSPASSCSSS
EMAHSPPSLGGAKIE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcgtgtttcagagaactgcccctgacctcaacgcc
tggcgtctcaagtcccctctggctccccgctccaactccgatatcaggatgtcaaaggca
ctagaggtggagaaagtaggggctgactcaccattggagggcacagattcagagcggaat
ggacctgaatcaaatcaccaggctcagtcaatgaaagtcaatccctttcctctttcacca
accctgagcagcagcaaaaataagatggaggagtgtggtgagatgtccccggccctctct
cacggcccgaccccctcacagacggccctgcaacatacacagctcatgcttaccggctcc
caactagcagggttgacagctctgttgccagcacagcagcagttgttgctgcagcaggct
caggcgcagctcctggctgcagctgtgcagcagtccagtgcagcccacgccgctcatgct
gcccacgcagccgcccaagccaatcagcaagctcaggcagccgcagcagcgaatcagcaa
gcccagcagcagcagacgggacaaacagggcagcaggcccagtcgcagtcccagagacag
ggacagagcacacaggaacagacagcccaaagtgttcctgtcccacctcctccaccccag
ctcaccctctcccagccaatccagctcaccgcccaggacatccagcagttgctgcagctt
cagcagttggtgttggtgcccggccacccgctcccatctcctgcccagttcctcctccca
caggcacagcagggccagcaaggactcctatcgacaccaaatcttattccgctacctcag
caaaaccaagggagcctgctgtccgctccaactagaatgggactccaagcacagcgagat
aagagtatggaggtgagcggtggtggaggcatgaccacagtgtcctcagtgacctctcac
cccgaagagcccagtgacctggaggaactggaacaatttgcccgcactttcaaacagaga
cgcatcaaactgggcttcacacagggagatgttggcttggccatggggaagctgtatggc
aatgacttcagtcagaccacaatctcccgctttgaagccctcaacctgagctttaagaac
atgtgcaagctgaagccactgctggagaagtggctcaatgatgcagagaccatgtccata
gacagtaccctgcccagccccagctccctgtcctcctcctctctgggcttcgacggcgtt
cctggtcgccgcagaaagaagagaaccagcattgagacaaatgtacgtgtggccctggaa
cgcgcattcatgacgaaccagaagcctacctcagaagagatcctgctgatcgccgagcag
ctcaatatggagaaggaggtgatccgggtctggttctgcaaccgccggcagaaagagaaa
cgcatcaatccctccagtgccacccctcccctgcccagccagccccccactgccccgcca
acgcacaaacagccctgctacagccctcacatgatgtctagccagctgtcccaggccgtg
accagtctcagcacaacagtgaccaccatgtcccctgtctgccctctgacttccagcctc
acctccacccacccctccctcagctccgcaccctccccagtgactcctcctcctcccccc
cgcagcacagccagcccagccactcccagccacagcacactcaaccttaacacaggctta
tggcgtatgggtaaaaagaacggtgacgtgtctaactacatcaccgattttgctgcaaac
ttgaggaacactgtgatgggagttaacacagggatgaaccaagccctcctaggtaacaat
cccttggccactatccaagccctagcagccagtggtggccagctgcctctttccagtctt
gaggggggcagtaaggtgatgctgggggcctctgggtgccagggagggggcctcccctcc
tccctcttcctcaaccaccccgccctcctccacatgggccagaaccccggcgctggactg
atcagcgccgccatagccaaagcctcccagccctcccccttccccttggccagcagcatc
agccccaccccctgctccccctccccctgctccagccccgcctcttcctgctcctccagc
gaaatggcacacagcccgccctctctgggcggagccaagattgagtga
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