Siniperca chuatsi (mandarin fish): 122882025
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Entry
122882025 CDS
T08948
Symbol
pole3
Name
(RefSeq) DNA polymerase epsilon subunit 3
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03030
DNA replication
schu03082
ATP-dependent chromatin remodeling
schu03410
Base excision repair
schu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122882025 (pole3)
03410 Base excision repair
122882025 (pole3)
03420 Nucleotide excision repair
122882025 (pole3)
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122882025 (pole3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schu03032
]
122882025 (pole3)
03036 Chromosome and associated proteins [BR:
schu03036
]
122882025 (pole3)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122882025 (pole3)
Enzymes [BR:
schu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122882025 (pole3)
DNA replication proteins [BR:
schu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
122882025 (pole3)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
122882025 (pole3)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
122882025 (pole3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
CIS_TMP
PPP4R2
BUD22
SpoU_methylase
DUF4746
DUF5427
RNA_pol_3_Rpc31
DUF3276
PFF1_TM
CDC45
DDHD
V_ATPase_I
Nop52
Motif
Other DBs
NCBI-GeneID:
122882025
NCBI-ProteinID:
XP_044064880
LinkDB
All DBs
Position
LG1:3392790..3398624
Genome browser
AA seq
152 aa
AA seq
DB search
MAERPEDLNLPNAVITRIIKEALPDGVNVSKEARRAISQAASVFVLYATSCANNFAMKAK
RKTLNAGDVLAAMEEMEFERFLEPLREALEVYKKGQKGKKEVSEQKRKDKEKKADSEHDR
SREEEEEEEEEQERMEEEPEAEEEEEEEEVEN
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaggccagaagatctgaaccttcccaacgcggtaatcacccgcatcatcaag
gaggcgctcccagatggggtgaatgtgtcgaaagaagcaaggagggccatatcccaagct
gccagtgtgttcgtgttgtatgcaacgtcctgtgcaaacaactttgccatgaaagccaag
cggaaaactctgaacgcaggagacgttttggctgcgatggaggaaatggagtttgagcgt
ttcctggagcctctcagagaagctttggaagtgtacaagaagggccagaaaggaaagaag
gaggtgtctgagcagaagcgcaaagataaagagaagaaggccgactctgagcacgacagg
agcagggaggaggaagaggaggaggaggaagagcaggagcgcatggaggaggagcctgaa
gctgaggaggaggaagaggaggaggaggtggagaactga
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integrated database retrieval system