KEGG   Siniperca chuatsi (mandarin fish): 122882025
Entry
122882025         CDS       T08948                                 
Symbol
pole3
Name
(RefSeq) DNA polymerase epsilon subunit 3
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03030  DNA replication
schu03082  ATP-dependent chromatin remodeling
schu03410  Base excision repair
schu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122882025 (pole3)
   03410 Base excision repair
    122882025 (pole3)
   03420 Nucleotide excision repair
    122882025 (pole3)
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122882025 (pole3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:schu03032]
    122882025 (pole3)
   03036 Chromosome and associated proteins [BR:schu03036]
    122882025 (pole3)
   03400 DNA repair and recombination proteins [BR:schu03400]
    122882025 (pole3)
Enzymes [BR:schu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     122882025 (pole3)
DNA replication proteins [BR:schu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    122882025 (pole3)
Chromosome and associated proteins [BR:schu03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    122882025 (pole3)
DNA repair and recombination proteins [BR:schu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      122882025 (pole3)
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone CENP-T_C CIS_TMP PPP4R2 BUD22 SpoU_methylase DUF4746 DUF5427 RNA_pol_3_Rpc31 DUF3276 PFF1_TM CDC45 DDHD V_ATPase_I Nop52
Other DBs
NCBI-GeneID: 122882025
NCBI-ProteinID: XP_044064880
LinkDB
Position
LG1:3392790..3398624
AA seq 152 aa
MAERPEDLNLPNAVITRIIKEALPDGVNVSKEARRAISQAASVFVLYATSCANNFAMKAK
RKTLNAGDVLAAMEEMEFERFLEPLREALEVYKKGQKGKKEVSEQKRKDKEKKADSEHDR
SREEEEEEEEEQERMEEEPEAEEEEEEEEVEN
NT seq 459 nt   +upstreamnt  +downstreamnt
atggcagagaggccagaagatctgaaccttcccaacgcggtaatcacccgcatcatcaag
gaggcgctcccagatggggtgaatgtgtcgaaagaagcaaggagggccatatcccaagct
gccagtgtgttcgtgttgtatgcaacgtcctgtgcaaacaactttgccatgaaagccaag
cggaaaactctgaacgcaggagacgttttggctgcgatggaggaaatggagtttgagcgt
ttcctggagcctctcagagaagctttggaagtgtacaagaagggccagaaaggaaagaag
gaggtgtctgagcagaagcgcaaagataaagagaagaaggccgactctgagcacgacagg
agcagggaggaggaagaggaggaggaggaagagcaggagcgcatggaggaggagcctgaa
gctgaggaggaggaagaggaggaggaggtggagaactga

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