Siniperca chuatsi (mandarin fish): 122882140
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Entry
122882140 CDS
T08948
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122882140 (irx4a)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122882140 (irx4a)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
122882140
NCBI-ProteinID:
XP_044065127
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Position
LG9:complement(19218960..19226257)
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AA seq
477 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSIADSGVAASGQTPVYCPVYESRLLATA
RHELSSAAALGVYGSPYTGGQGYGNYVTYGTDASAFYSLGTFDTKEASASAHAGITQATA
YYPYDPTLGHYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDEDEDGSQEEQIKSENNEDET
RSRADKDLQLSDLDDFDTLESESSECELKHRYHMNTHMSTTGDCPTEHLIKDASLKISIP
VSLGGEQDLSKSCLKTNPEDFQPDSRQQVKACYNQQQQQQQQGHQILDGKPRIWSLAQTA
TSLNQTEYPSCMLRCQPPPSSLTPSPAATSPVTGLDNRQDSPVTTLRNWVDGVFHDPLFR
HSTLSQALTNTTVSWTTNSKGAILEAERSTAALQQHQDSSKDSDMSFPKTINKLFCS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccctattcgtctgctccacaattcctgatgacaacc
aactctctgaccacttgctgcgagtccaccggcagatccatagccgactccggagtagcg
gcgtccgggcagacaccagtctactgtcccgtatacgagagccggttactggccacggcg
aggcatgaactcagctcagccgccgctctgggcgtgtacgggagcccctacaccggcgga
caaggctatgggaattacgttacatatggcacggacgcctctgctttctactcgctgggc
acattcgatacaaaagaagcctcagcttctgcacatgcgggaataacccaagcaacagcc
tactatccttatgatcctaccttgggacattatcagtatgacagatatggttccatggat
gggggaacaaggcggaagaatgccacgcgcgagacgaccagcacgctgaaggcctggctg
caggagcacaggaagaacccgtatccaactaaaggagagaagatcatgctggccatcatc
accaagatgacgctgacgcaggtctccacctggttcgcaaatgccaggaggaggctcaag
aaggagaacaagatgacatggccgcccagaaacaagggctcagaggagaagagatacgac
gaggatgaagatgggtctcaggaggagcagataaaaagcgagaacaatgaggatgagacc
agaagtcgggctgataaggacctccagttgagcgacttggacgatttcgacacgctggag
tctgagagctcggagtgtgagctgaagcaccgataccacatgaacacacacatgtcaacg
acgggcgactgccccaccgaacacctcatcaaggacgcgtctctgaaaatctccatccct
gtttctttgggaggggagcaggacttgagcaaaagttgcctcaaaacgaacccagaggat
ttccaaccggacagcagacagcaggtaaaagcatgctataaccagcaacaacaacagcag
cagcaagggcaccagatattagacggcaaacctcggatctggtctttggcccaaactgcg
acgtccctgaaccagactgagtacccgtcctgtatgctgaggtgccagccgccgccctcc
tccctcaccccatccccagccgctacctcacccgtgaccggcctggacaacaggcaggac
tcgccggtcacgaccctgagaaactgggtggacggggttttccacgaccccttgttcagg
cacagcactttgagccaggctctgaccaacaccaccgtctcttggaccacgaactccaaa
ggcgccattctggaggctgagaggagcacggcggccttgcagcagcatcaagactcctcc
aaagacagtgacatgagtttccccaaaactatcaacaaacttttctgctcctaa
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