Siniperca chuatsi (mandarin fish): 122882154
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Entry
122882154 CDS
T08948
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122882154 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
schu03310
]
122882154 (nr1d2a)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122882154 (nr1d2a)
Nuclear receptors [BR:
schu03310
]
1. Thyroid hormone like
1D. Rev-Erb
122882154 (nr1d2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
OmcA-like_N
Motif
Other DBs
NCBI-GeneID:
122882154
NCBI-ProteinID:
XP_044065171
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Position
LG9:complement(5403437..5410194)
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AA seq
606 aa
AA seq
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MPEDVGTAKPGGVIAYISSGSASSPESCMSTSPRSGYLSTSPTLSRPSLPSRAVGMVVDI
SPPGKNGHQRSHGMEKAGRSSTSAKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKG
FFRRSIQQNIQYKKCLKMESCTIMRINRNRCQQCRFKKCLAVGMSRDAVRFGRIPKREKQ
RMLLEMQNAMNNMMSNNSQLHSMLHGHQSPSLPVEAMTNDASSSSSSSASDSPSCSNPSS
PQCPQDSESVVSMDTNSSSASSCASDSGEDEAVVTMSRQHQDAFAFSQQRSPRQGQASPS
PVTVALETRCDGRMEEQQESWNCWNSNVVLRGYQHSSYSNSQHVTDTAYREEGGVYQQQP
QQQQQQQLNSTPSCKPSEDSQRQHEFNTQTASSGYNGPTNCVNNRAHLVCPMNTSPYVDP
RKPSQEIWEEFSMSFTPAVREVVDFAKRIPGFRDLPEHDQVSLLKAGTFEVLMVRFASLF
NMVERTVTFLSGKRYSLDTLRSLGAGELLNSMCEFSEKLVALQLDSDEMSLFTAVVLVSA
DRSGIQDLNSIEALQDKLIRALRNLVIQNHGDEAATTFTKLLLKLPELRSLNNMHSEELL
SFKVHP
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggacgttgggacagccaagcctggaggagtcattgcctatatttcctctggc
tcagcctccagcccagagtcctgtatgagcaccagccccagaagcggctacctgtcgaca
tcaccgactctgtcccgcccctcgctgcccagcagggccgtgggcatggtggtggatatc
tctccgccgggcaagaatggccaccagcgtagccacggcatggagaaggcggggcgctcc
tccacatctgccaagagcagcatcaccaaaatcaatggcatggtgctgttgtgcaaggtg
tgtggtgatgtggcctcgggcttccactatggcgtccatgcttgcgaaggctgcaagggc
ttcttcaggagaagcatccagcaaaacatccagtacaagaagtgtcttaagatggagagc
tgcaccatcatgaggatcaacaggaaccgctgccagcagtgtcggttcaagaagtgtctg
gctgtcggcatgtccagagatgctgtccgatttggccgcatcccaaagcgggaaaagcag
aggatgctgctggagatgcagaacgccatgaacaacatgatgagcaacaacagccagctg
cacagcatgctgcacggccaccagagcccgtcgctgccagtggaggccatgaccaacgat
gccagctcctcatcctcctcctctgcttctgattccccgtcgtgctccaacccctcctcc
ccgcagtgcccccaggactcagagtctgtggtttccatggacaccaactccagctctgct
tcctcttgcgcatctgacagcggcgaggacgaggccgtcgttacgatgagcaggcagcac
caagacgccttcgcgttcagccagcagaggtcgccgagacagggccaggcctcgccttcg
ccggtcacggtcgccctggagacgcggtgcgacggccgcatggaggagcaacaggagagc
tggaactgctggaacagcaatgtggttttgagaggttaccagcacagttcttacagtaac
agccaacacgtcaccgacactgcttacagggaggaggggggagtttaccagcagcagcct
cagcagcagcagcagcagcagctcaacagcacccctagctgtaaaccatcagaagacagc
caaagacagcatgaatttaacacacaaactgcctcaagtggttataatggaccaaccaac
tgcgtgaataacagagcacacttggtctgtccgatgaacacgtcaccctacgtggacccc
cgcaagccgagccaggagatctgggaggagttctccatgagcttcacccccgccgtgcgg
gaggtggtcgacttcgccaagaggatcccgggcttccgtgacctccccgagcacgaccaa
gtcagcctgctgaaagctggaactttcgaggtgctgatggttcgattcgcctctctgttc
aacatggtcgagcggacggtgaccttcttgagcggcaagcgctacagcctcgacacgcta
cggtcgctgggcgccggcgagctgctcaactccatgtgcgagttcagcgagaagctggtg
gcgctgcagctcgactcggacgaaatgagcctcttcacagccgtggtgcttgtctcagcc
gatcgctcagggatccaggacctaaactcaattgaggccctgcaggataaactgatccgg
gcactgcgaaacctggtgatacagaaccacggcgacgaggcggccaccaccttcaccaag
ctgctgctcaagcttcccgagctgcgttcactcaacaatatgcactcagaggagctgctc
tccttcaaagttcacccttga
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