Siniperca chuatsi (mandarin fish): 122882170
Help
Entry
122882170 CDS
T08948
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122882170 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122882170 (snx27b)
Membrane trafficking [BR:
schu04131
]
Protein recycling
Others
Others
122882170 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122882170 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
PDZ_2
SNX17_FERM_C
SNX17-31_F2_FERM
USP7_C2
RA_3
Motif
Other DBs
NCBI-GeneID:
122882170
NCBI-ProteinID:
XP_044065207
LinkDB
All DBs
Position
LG9:complement(13297430..13309725)
Genome browser
AA seq
571 aa
AA seq
DB search
MADVEGEGICSSVPPLPHPSSRNGSGSGNVTPGTRGSCQTATTVTSGPRLVRIVKSNSGY
GFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGAT
HKQVVDLIRAGERELVLAVLSVPPQEADCLDPGDDVSAQSCYDYSDKQAVPISVPSYKHT
ELNQEKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFANFTFPKLPGKWPFSLSEQQLD
ARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTLTVRVRK
NSTTDQVYQAVVMKLGMDSVTASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAIPGT
CLTLRKWLFTTEEEILLNDNQLAVNYFFHQAADDVKKGFIKAEQKSYQLQKLAEQKKMSM
YLSLLRGCEGYNEIIFPHCSCDSRRKGHVITAISIHHFKLHACTEEGTLENQVIAFEWGE
MQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATD
KDNKNCSKDEYFPAAEAQKGWRHLGREIVTS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgagggagaaggaatttgttcatcggttcctccgttgcctcacccttcc
tctcgtaacggctccggtagcggtaacgttacaccgggcacccgcggcagctgccagacg
gcaaccaccgttacttcaggcccacggctagttcgaatagtgaagtctaattcaggctat
ggtttcaatgttcggggacaagttagtgaaggtgggcaactacggagcattaacggggaa
ctgtacgctccactgcagcatgttagtgctgtcctaccgggaggtgccgccgacagagcc
ggtatttcgaagggggacaggattcttgaggttaacggtgtgaatgtagagggagcgacc
cataagcaggtggtggacctgatccgggctggagagagggagctggtgctggccgtgctg
tctgtaccgccccaggaggccgactgcctggatcccggagacgacgtttcagcccagtcc
tgctatgactactccgacaagcaggccgtccccatctctgtgccgagctacaaacacact
gagctcaaccaggaaaagtttgtggtatataatgtgtacatggcaggcaggcagctgtgc
tccaagcgttaccgtgagtttgtgatcctacaccaaaacctgaagagggagtttgccaac
tttacgttccccaagctgcctgggaaatggcctttttccctatcggagcagcagctggac
gcacgacgcagaggcctggaagaatacctggagaaagtgtgctctgtacgggtaattgga
gaaagtgacatcatgcaggagttcctgtctgaatcagatgagaactataacggcgtgtca
gatgtggagttgagaatagccatgcccgataaaaccacgctcactgtcagagttcgcaaa
aactctactacagaccaggtctaccaggctgtggttatgaaactagggatggacagtgta
acagccagttactttgctctgtttgaggtcatcaaccacaccttcgtgcgtaagcttgcc
cccaatgagttcccccacaaactgtatgtacagaactatacctcagccatcccaggaacc
tgcctcaccctgcgcaagtggctcttcactacagaagaggagattctgctcaatgacaac
cagcttgctgtcaactacttcttccaccaggctgcagatgatgtgaagaaaggcttcatc
aaagcagagcagaagtcctaccagctgcagaagctggctgagcagaagaagatgtccatg
tatctgagtttgttgaggggttgcgagggctacaatgagatcatattcccccactgttcc
tgcgactcccgacgtaaaggccacgtcatcacagccatcagcattcaccactttaagctg
cacgcctgcaccgaggaagggacactcgagaaccaggtgatcgcatttgagtggggggag
atgcagaggtgggacacagatgaggagggcatggccttttgctttgaatatgcacgagga
gagaagaaaccacgttgggtcaagatatttacaccctactttaactacatgcacgagtgc
ttcgagagagtcttctgtgagctgaagtggaggaaggaggtggaagaggaggctacagac
aaggacaataagaactgcagtaaagatgaatattttccagctgctgaggcacagaaggga
tggaggcacctaggaagggagattgttacctcttaa
DBGET
integrated database retrieval system
