Siniperca chuatsi (mandarin fish): 122882212
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Entry
122882212 CDS
T08948
Symbol
nbn
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03440
Homologous recombination
schu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122882212 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
122882212 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schu03032
]
122882212 (nbn)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122882212 (nbn)
DNA replication proteins [BR:
schu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
122882212 (nbn)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
122882212 (nbn)
BRCA1-C complex
122882212 (nbn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
122882212
NCBI-ProteinID:
XP_044065317
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All DBs
Position
LG9:13839204..13854404
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AA seq
841 aa
AA seq
DB search
MWILTPLQPGGVTHYLFSSKEYVVGRKNCDILLPSDQSISRAHAHLTATDQTLTLKDTSK
YGTFVNSQRLTENTPVTLKSGDNVTFGVFDSKFSVEHQKPVVCSSCLGNDGKASLSETLL
TLGGKLVNSWTQDCTHLAMPSAKVTVKTISALLCCRPIVKPEFFSELNKAAQQKLPPPKA
ESFIPEIDEPSLNKEDVNFGAIPVRKQLFTGKTFIFLSAKQLKRLSAAVSFGGGRSQLLE
EGSLPRDLLESPQSCVVDATTGSSQALLPFSTTEWANSVKNIVQRKGLRVITESEIGLAA
VYASCNKFCNPSSVISDSVLGSVQNMKPRIPSASLSQSVAVDETVLPSTSQNITAYAANT
EPSQGTELCKVTGVTAVGETPEKKQNQNAGQLCGSKPVAKKTATQCIVADTMRSLFNTVE
NTDSQRKKPESKPTGAGSSGIRSQTSLPRTNGGTKTFLQKQSPPKQQIYAQASPQKQSTL
TSFFQTVNKKRPLEDELFAVMSEPKRPVLESSISIQAPNTPAATSQTPLGSAADLFVGQS
EVQSDRVSHAVQEEPRSRKRKEMEAEIQMDELESIMSEDMDCFDEQPSDNQGQQAQLMMH
SSAKQKQGLKTVEASSKKQRVHVEENGTNKRPQVEKEAGSHNNHSQKSEQHIVSIKTEQV
HPFEYRTTYHEPSNPPEVSTASTSKNIEPFEDDEASFIEDLELLKADICQPKEETKTPLK
PVTVKQELQESKIDEDLPKKVVLVEFRSLTVTAPPKTKPKRMQDIGYAKNFKCFRKICRP
GAGGSPHIIGGSDLLVHNRGKNSDLDEWLKDAAEEERQSRRDESVGDDLFRYNPTKLTRR
R
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactgacacccctgcagcctggaggtgtgacccactatctcttctccagtaaa
gagtatgtggtggggcgcaagaactgtgacatcctcctacccagcgaccagtccatcagc
agggctcatgctcacctcactgctactgaccagaccctgactctaaaagacacctccaag
tatggtacatttgtcaacagccagcgcttgacagagaacacaccagtcaccctgaagtca
ggggacaatgttacatttggggtttttgacagcaaattcagtgtggaacatcagaagcca
gtggtgtgttcgtcgtgtttgggcaacgatggcaaggcatcactctctgagaccctgttg
actttgggtggaaagctggtcaacagctggactcaggactgcacccacctggccatgccc
tctgctaaagtcaccgttaagactatttctgccctgctctgctgccgtcccatcgtgaag
ccagagttcttctcagagctcaacaaagctgctcagcaaaaattaccccctcctaaagct
gagagtttcatccctgagatcgatgagcccagcttgaataaagaggatgttaactttgga
gcgattccagttcgcaaacagcttttcactggaaagaccttcatattcctcagtgccaaa
cagctgaagcgcctgagtgcagcagtgagttttggaggtggcaggagtcagctgctggag
gagggctctctgccccgggacctgctggagtctccacagagctgtgtggtcgatgctaca
acaggcagctcccaagctctgcttcctttctctaccacagagtgggcaaactctgtgaag
aacattgttcaaagaaaaggccttcgagtcatcacagagtctgaaattggtttggctgcc
gtctatgcttcctgtaacaagttctgcaatccatccagtgtaatatcagactcagtttta
ggctcagtccaaaacatgaaacccagaattccaagtgcttcgctgtcacagagcgtggcg
gtggatgagactgtgttaccttcaacatcccagaacatcacagcttatgcagctaacaca
gagccatcacaagggacagagctatgtaaagttacaggggtgacggcagtaggggagact
cctgagaagaagcaaaaccagaatgctggtcagctctgtggatccaaacccgtagctaag
aagacagccactcagtgcattgtggctgatacaatgagatcattgtttaacactgtagag
aacacagactcacagaggaagaagcctgagtccaaaccgacaggtgcaggcagcagtggc
attaggtcccagacatcccttcctaggaccaatggtggcacaaagacattcctacagaag
caatctcctccgaaacaacaaatctatgcacaagcttccccacagaaacaatcaactctg
accagtttctttcaaacagtcaacaagaaaaggcctttggaggacgagctcttcgctgtt
atgtcagagccaaaaaggcctgtactggaatcatccatcagcatacaggcaccaaacacc
cctgcagcaacatcccagactccactggggtcagcagctgatctttttgtaggacagtca
gaggttcagtcagacagggtctcccacgctgtccaggaggagccacggagcagaaagagg
aaggagatggaagcagagatacagatggatgaactggagtctattatgtctgaggatatg
gactgctttgatgagcagccctcagataatcaaggccagcaagcacagctaatgatgcac
agttcagccaaacagaaacaaggtttaaaaactgtggaggcctcaagcaagaagcaacgg
gtccacgtagaagaaaatggaaccaacaaaaggccacaggtggaaaaagaggcaggttcc
cataacaaccacagccaaaaatctgaacagcacattgtctccatcaagacagagcaggtc
catccttttgaatacaggacaacttatcatgagcccagcaatcctccagaagtgtcaact
gccagtacaagtaaaaacattgagccttttgaagatgacgaggcatctttcattgaggat
ttagaactactcaaagcagatatttgccaacctaaagaagagaccaagactcctctgaaa
cctgttacagtcaaacaggagcttcaagagtcaaagattgatgaagaccttcctaaaaag
gtggtgttagtggagtttagatctctcactgtgactgcacctcccaaaaccaaaccaaag
aggatgcaggatatcggctatgcaaagaacttcaaatgtttccgcaagatctgccggcca
ggcgcaggcggctcaccccacattatcggagggtctgatctgctggttcacaacaggggc
aagaactctgatctggatgaatggctgaaagatgcagctgaggaggaacgtcagagcaga
cgagacgagagtgtaggagatgacctctttagatacaaccccaccaaactaaccaggaga
agatga
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