Siniperca chuatsi (mandarin fish): 122882243
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Entry
122882243 CDS
T08948
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schu03009
]
122882243 (dcaf13)
04121 Ubiquitin system [BR:
schu04121
]
122882243 (dcaf13)
Ribosome biogenesis [BR:
schu03009
]
Eukaryotic type
90S particles
Other 90S particles
122882243 (dcaf13)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122882243 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
eIF2A
KNTC1_N
NBCH_WD40
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
122882243
NCBI-ProteinID:
XP_044065376
LinkDB
All DBs
Position
LG9:24597925..24608459
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AA seq
445 aa
AA seq
DB search
MKVKVLSRNPDDYVRETKLDIQRVPRNYDPALHPFEVSREYTRALNATKLDRVFAKPFLA
SLDGHRDGVNCMAKHTTSLSTLLSGSCDGEVKVWNLTKHECVRTLQAHEGFVRGMVVRYC
GTSFFTVGDDKTIKQWKIEAPGYGEEEEPLNTILGKTVFTGLDHHQKEAVFATCGQQVDI
WDEQRSSPIRSFTWGVDSFSSVRFNPVETELLASCASDRSIVLYDMRESAPLKKVIMTMR
SNTLCWNPMEAYYFTCSNEDYNLYTYDMRYLDRPITVHMDHVSAVLDLDYSPTGKEFVSA
SFDKTIRIFPKDGGHSREVYHTKRMQHVICIKWSADNKYILSGSDEMNIRLWKANAAEKL
GVLAPREREARNYSQKLKEKFQHHPQIRRIAHHRHLPKNVYHQSKELRIMKEARRRKERN
VRKHSKPGAVPVVSEKEKHVVTVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtcctctcgaggaacccggatgattatgtccgggagaccaaactagat
attcagcgtgttcctagaaactatgacccagctcttcatccgtttgaggtgagcagagag
tacacccgggctctgaatgccactaaacttgacagggtgtttgccaagcctttcctggcc
tctctggatggacacagagatggggtgaactgcatggccaagcacaccacgagcctctcc
accctgctctctggctcctgcgatggggaggtgaaagtgtggaatctgaccaaacatgaa
tgtgtccgcacgctccaagcacatgaaggttttgtccggggaatggttgtccgttattgt
ggaacatccttctttacggttggcgatgacaaaacaatcaagcaatggaaaattgaggcg
ccaggttacggagaggaagaggagccactcaacactattctgggcaagacagtcttcaca
ggactggaccatcaccagaaggaggctgtgtttgcaacatgtggccagcaggtggacatc
tgggatgagcagaggagcagcccaatccgctctttcacctggggcgtagacagcttcagc
tctgtccgtttcaaccctgtggagactgaacttcttgcaagctgtgcctctgacagaagt
atagtactgtatgacatgagagaatccgcaccacttaaaaaggttattatgacaatgagg
agcaacacattatgctggaaccctatggaagcctattacttcacatgttcaaatgaggac
tacaacctctacacatatgacatgaggtacctggaccggccaatcactgtgcacatggac
catgtctctgcagtgctggatcttgactattctcccactgggaaggagtttgtatctgcc
agttttgacaaaaccatccgcatcttccccaaggacggtggtcacagcagggaagtctac
cacaccaaacgcatgcagcatgtcatctgtataaagtggtcagcagacaacaaatacatc
ctgagcggttctgacgaaatgaatatccgactgtggaaagccaacgcagctgagaaacta
ggagtgctggcccccagagagagagaggccagaaactacagccagaagctgaaggagaag
ttccagcaccacccgcagatcagacgcatcgctcatcaccgacatctacccaagaacgtc
taccaccagagcaaggagctgaggattatgaaagaggctcgccgtaggaaggagaggaat
gtccgcaagcacagcaaaccaggcgctgttcctgtggtgtctgagaaggagaagcatgtt
gtgactgtggtcaaatag
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