Siniperca chuatsi (mandarin fish): 122882300
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Entry
122882300 CDS
T08948
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein isoform X1
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122882300
Membrane trafficking [BR:
schu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122882300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
WD40_CDC20-Fz
Patched
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
122882300
NCBI-ProteinID:
XP_044065483
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All DBs
Position
LG9:complement(4206987..4254896)
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AA seq
1355 aa
AA seq
DB search
MFPLLPGGRAEQSHTLNESRGEHYVNHNAPLKLKKTSAAAFRGHKRQRTREITWSPISRS
LDAPRRTVLGRAVLPNGRELTPSVRMTLREQLREKIAAAFYRHGLLCASYPVPIILFTSA
SILTCCYPLLRLPLPGTGPVEFTTGVRDYSVPSHEPQGDLGVRPDWYQGPPVAYIQQVLV
KAAVSPWDSSLVPVDVFRSPLGRAFSLLEEIRNHVHSDNSGIRSLETLCLQVTGLFPGLR
RMQSVLPEHGCLLVSPGNYWQNQRELFDSDPDLLKTIQKHEPKGLHTSATLRDLLFGVPG
KYTGVSHYNKKRVVTYTITVVLSSYDARFLGSLRARLKQLHPSANCSLRDDHMVHVHFKE
EIGIAELIPLVTTYIILFAYIYFSTRKIDMVKSKWGLALAAVVTVLSSLLMSVGLCTLFG
LTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPVDLEVKLRIAQGLSNESWSIMKNMAT
ELCIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQMFFFTTVLSIDIRRMELADLNRRLPA
EAGLPPPKPGPLRPREVPPPPRPSPHTITLQTPAFRNLRLPKRLRVVYFLARTRLAQRII
MVGTVIWIGILVYTDPAGIRTYLAAQVSEQSPLGDPGGGGLPPHLGVAPVFRGGDPTSTL
SIHPAPDPTPLPENQSQGHHGSARAGPLPQGPPAVPQITWGAEDEEGWRRLSFRHWPSLF
SYYNITLAKRYISILPVIPVTVHLSPQEAIETRHPQDTRHPPPPIPKVPDLQTDLTLYKV
AALGLAAGVLLVLLLFCLYRVLCPRNYGQNGVAHGRRRRGDLPCDDYGYSPPISEISPLL
LRGHSMDIECLASDGMLLASCCLAGQIRVWDAQTGDCLTVIPKHRLRRSSSSGCWEQRDG
WDSASGAAESECFGSDACSSISGDGLSEEEGYPLRRRTAPTRPTLFTDQPDLTPLIDTNF
TSQPPSHLSTPPRGGFDFGGLVERAYMEHEPPSPSTYPSPSSASSSPPSGAQLQRRPSLG
DAAALLTQERASTAGTHATADWESSVWAMELRGNLIAAGRSSGKLELWDAVEGSLRCSNE
DGVSGITALAFLNNRIVAARLNGSLDFFTVEINKPLCLLQYRGAPGRGSMPPSPCYSSED
VISCQLTRSVQCAHQKPITVLRAAAGRVVTGSQDHTVRIYRLEDSCCLFTLQGHSGGITA
IYIDQTMVLASGGQDGAICLWDVLTGSRVSHVYGHRGDVTSLVCTTSCVISSGLDDLICI
WDRSTGIKLYSIQQEVGCGASLGVISESLLVTGGQGCVSFWDLNFGDLLQTVYLGQSSDG
QGVRQLLVLDNAAIICDFGSELSLVYVPSVLEKLD
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgttgctcccggggggacgagccgagcagtcgcacactctgaatgaatcaaga
ggggagcactatgttaaccacaacgcaccgcttaaactaaaaaaaaccagtgctgctgct
ttcaggggacataaacggcagcgaaccagagagataacctggtctcccattagcaggtcc
ctggatgccccgcggcgcaccgtcctcggccgcgcagtgcttcccaatggccgggagttg
accccgtccgtcaggatgacgctgcgtgagcagctgagagagaagatcgcggcggccttc
taccgccatgggctgctgtgtgcctcctacccagtacccatcatcctcttcacctccgcc
agcatcctcacctgctgctatccgttattgaggcttcccctgcctgggacaggtcctgta
gagttcaccacaggggtgcgagactatagcgtcccttcccatgagcctcagggagacctc
ggagtacggcccgactggtaccagggtcctccggttgcctacatccagcaggtgttggtg
aaggcggcggtgtctccttgggacagcagccttgtgccagtggacgtgtttcggtcgccg
ctgggtcgagcctttagcctgctggaggagatccgcaaccatgtccactccgacaactcc
gggattcgcagtctggagacactgtgtctccaggtgacaggcctgtttccagggttacgg
cggatgcagtcggtgctgccagagcacggctgcctgctcgtttctcccggcaactactgg
cagaaccagcgggagctgttcgactcggaccccgacctcctcaagaccatccagaaacat
gaaccgaaaggcctgcacacctcagccacgctgcgagatctgctgtttggcgtccctggg
aaatacactggggtcagtcactacaacaagaagagggtggtgacatacacaatcactgta
gtgctgtccagctacgatgcaaggttcctgggcagcctgcgggcccgtctgaagcagctc
cacccgtcagccaactgcagcctgagagacgaccacatggttcacgtccacttcaaagag
gagattggcatcgctgagctcatccccctcgtcaccacatacatcatcctttttgcctac
atctacttctccacacgtaaaattgacatggtgaagtctaagtggggtctggctctggct
gctgtggtcacagtcctcagctctctgctcatgtctgtgggactgtgtacactgtttgga
ctgacacccacgctcaatggaggggagatttttccttacctggtggtggtgatcggcctg
gagaacgtcttggtcctcaccaagtccgtggtgtccacccccgtcgacctcgaggtcaaa
ctccgcattgctcagggccttagtaatgagagctggtctatcatgaagaacatggccact
gaactgtgcatcatcctcattggatatttcactctggtgccagctatccaggagttctgt
ctgtttgctgttgtggggctggtgtctgacttcttcctgcagatgttcttcttcaccaca
gtactatctattgacattcgacgcatggagctggcggacttgaaccgccgcctgccagcc
gaagcaggactaccgccacccaagcctggcccgctgcgtccacgcgaggtcccccctccc
ccacgaccttccccccacacaatcaccctgcagaccccagccttcaggaacctgaggctt
ccaaagaggttgcgtgtggtgtacttcctggcccgtacacgactcgctcagcgcattatc
atggttggcacagtgatctggatcggcatcctggtctacaccgacccagccggaatacgc
acctacctggctgcacaggtgtctgagcaaagccctctgggagatcccggaggaggtggt
ctgccccctcacctgggggtggcccccgtctttcgtggaggagatcctaccagcacactc
agcatccaccctgcaccagatccaactcccttacctgagaaccaatcacagggccaccat
ggctcagctagggcagggcccctcccccagggtccgcccgctgttccccagatcacctgg
ggggcggaggatgaggagggctggaggaggctctccttcaggcactggccatcgctcttc
agctactacaacatcactttagccaagaggtacatcagcatcctgcctgtcattcctgtc
actgttcacctgagcccccaggaggccattgagacacgtcatcctcaggacacgagacac
ccccctccacccatccccaaagttccagatttacagactgacctcaccctctacaaggtt
gcagctctgggcctggcggcgggcgtcctgctggttctgctgctcttctgtctctaccgg
gttctctgtccacgtaactacggccagaatggcgtcgctcatgggcgccggcgcagaggg
gacctgccctgcgatgattacggttactcgccacccatcagcgagatctcaccactgctg
ctgaggggccacagtatggacatcgagtgtttggccagtgatgggatgctgctggctagc
tgttgcctggcaggacagattcgggtttgggacgcccagactggtgactgtttgacggtc
atcccaaagcacaggctcagacggagcagcagcagtggctgctgggagcagcgggatggc
tgggacagcgcgagcggagcagcagagtcagagtgttttggctctgacgcttgctcctcc
atcagtggtgacggcctttcagaagaagagggctacccgctgagacgccgcactgctccc
acacggccgactctattcaccgaccagcccgatctcacccctctcattgacactaacttc
acctcccagcccccctcccacctctccaccccacccagaggaggctttgactttggaggt
ctggtggagcgcgcctacatggagcacgagcctccctcaccctccacctacccctctcct
tcctctgcctcctcctccccgccctcaggagctcagctccagagaagacccagcttaggg
gatgcagctgccctcttaacccaagagagagcctccacagcagggacgcatgcgactgca
gactgggaaagctctgtctgggccatggagctgagaggaaatctgatagctgctgggagg
agcagtggtaaactagagttgtgggatgcagtggaaggatcgttgcgctgcagtaatgaa
gacggagtctctgggatcacagctctagcattcctcaacaacagaatcgtggcggctcgg
ctgaacgggtctctagatttcttcactgttgagataaacaaacctctgtgtctgctgcaa
tacagaggtgcccctgggcgaggcagcatgcctccctctccctgttacagcagcgaggac
gtgatcagctgccagctcacgcgctcggtacagtgcgctcaccagaagccgatcacggtg
ctgcgagcggccgccgggagggtcgtcactggtagccaggaccacactgtccggatttat
cgtctagaggactcgtgttgcctcttcaccctgcagggtcactctggagggatcacagcc
atctacatagaccagacgatggttctggcgagcggagggcaggacggcgccatctgcctg
tgggacgtcctgactgggagccgtgtcagccatgtttacggtcaccgtggcgacgtcacc
tcgctggtctgcaccacctcttgtgtcatcagctcgggactggatgacctcatctgcatc
tgggaccgcagcacagggatcaagctctactccatacaacaggaggtgggttgcggtgcc
agtctgggagtgatctccgagtccctcctggtgacggggggccagggctgcgtctcgttc
tgggacctgaacttcggcgacctgctgcagacagtctaccttggccagagcagcgacggc
cagggcgtccggcagctgcttgtgctcgacaacgccgccataatctgcgacttcggcagc
gagctcagcctggtgtacgtgccctcggtgctggagaaactagactga
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