Siniperca chuatsi (mandarin fish): 122882449
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Entry
122882449 CDS
T08948
Symbol
cacna2d3a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
schu04260
Cardiac muscle contraction
schu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122882449 (cacna2d3a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
122882449 (cacna2d3a)
04261 Adrenergic signaling in cardiomyocytes
122882449 (cacna2d3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122882449 (cacna2d3a)
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122882449 (cacna2d3a)
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
122882449
NCBI-ProteinID:
XP_044065750
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Position
LG10:18163783..18289535
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AA seq
1163 aa
AA seq
DB search
MMVNWLLTWQSFLHTIWLPSGNTRYSMNMLKQKQKEEAMFRNKKGEALGFSVWWGNEVHL
GKVLWLPAAAEGKGTDGLSLSSVISLTLARKKDGQDDGKYNFNCLMTTYNSNMYTSMKYK
EFERAVRVEEIDGLRLVKRLAEDMEEMFHKKAQAMKRLVEAAEEAHLQHEEDPNLQYEYF
NAVLINEVDEEGNSVELGGEFILQPNDHFNNLSVNLSLSVVQVPTNMYNKDSAIVNGVYW
SEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVIAFDCRNRKWYIQAA
TSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNEELHYVEPCLNGT
LVQADVTNKDHFREHLDKLFAQGIGMLDIALTEAFSLLSDFNETGRGSECSQAIMLVTDG
AVDTYDAIFAKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYFTQISTLADVQENV
MEYLHVLSRPKVIDQEHDTVWTEAYIDSTLPQAQKLEDGQDPVLMTTVAMPVFSTKNETR
NRGILLGVVGTDVPVSELLKTIPKYKLGIHGYAFAITNNGYILTHPDLRPLYGDGKKRRK
PNYSSVDLSEVEWEDKDDTLRNAMVNRKTGTFSMEVKKSVDKGKRVLVLHNDYYYTDIKG
TPFSLGVALSRGHGKFFFRGNVTVEEGLHDLEHPDVALADEWTYCNTDEHPEHRYLSQIE
AIKLYLSGHEPHLQCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSENSDKGVEIAYLGTR
TGLSRINLFVVPDELTNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTFVYSLPFNTGS
ENKSVVLASTAIQLLDERKSPIAAAVGIQMKLEFFQKKFWTASRQCAALDGKCSISCDDE
NINCYLIDNNGFILVAEDYTLTGKFFGEAEGAVMSKLLQMGSFKRVTLYDYQALCWVFSE
SSDSGHTLLDPYFAFFSAMKWMLTELVIFLVEFNLYSWWYSDLTAKAQRMGRTMQVPCDT
EYPAFISERTIKENTGNLDCDGCINSCYSTRTFCYTLLAAFARRAAGRSFVIQQIPSSNL
FMVVVDNKCDCSMFEPITMDPIEIMYNESLKCERLKMQKDRRRPDTCHPFHPEENSMECG
GAVVLAPSLAATLLCVLLALFPR
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgaactggttgctgacttggcaatcctttctccatactatatggctgccatca
ggcaacaccagatacagtatgaacatgctgaaacagaaacagaaggaagaggcgatgttc
agaaacaagaagggtgaagctttgggcttcagcgtttggtggggaaatgaagtccatctc
ggcaaagtactctggctcccagctgctgcagaagggaaagggacagatggactcagtctc
tcatcagttatctctctgaccctagcgaggaaaaaagacggacaagatgatgggaagtac
aattttaactgcctgatgacaacgtacaactctaatatgtacacaagtatgaaatacaag
gagtttgagcgggcagtgcgggtggaggagattgatgggctgcggctggtaaagaggctg
gcagaggacatggaggagatgtttcacaagaaggcccaggcaatgaagagactggtagag
gcagcagaggaagcccacctacagcacgaggaggatccaaacctacagtatgaatacttc
aatgcagtactgatcaatgaggtggatgaggaggggaacagcgtagagctgggaggagaa
ttcatcctgcaacccaatgaccactttaacaacctgtcagtcaacctcagtctcagcgtg
gtccaggtgcccaccaacatgtacaacaaagactctgcaattgtcaacggagtgtactgg
tctgaggccttgaataaagtgtttgtggataactttgagagagacccatcactcatatgg
cagtactttggcagtgccaaaggcttttttaggcagtaccctgggatcaagtggaagcca
gatgaacatggggtcatagcttttgactgtcgtaaccggaagtggtacatccaggctgcc
acctctccaaaggatgtggtcattttggtggatgtcagtggcagcatgaaaggcctcagg
ctgactattgccaggcagactgtctcctccatactggacactcttggagatgacgacttt
tttaacatcatcgcttacaatgaggaattgcattatgtggagccgtgcctaaatggaact
ctggtccaagcagatgtcaccaacaaagatcatttccgggagcacctcgacaagctgttt
gcccaaggcattggtatgttagacatagctctgactgaggccttcagtcttctcagtgac
ttcaacgagactgggaggggtagtgagtgtagccaggccattatgttggtgacagatgga
gcagtggacacatatgatgccatctttgccaagtataactggccagagaggaaggtccgc
atattcccatacctgattggtcgagagtcagccttcgcagataatctgaaatggatggca
tgtgctaacaaaggctacttcactcagatttccacattagcagatgtgcaagagaatgtg
atggagtatctccacgtgctgagtcgtcccaaggtgatcgaccaggagcacgacacggtg
tggactgaggcctacatcgatagcactctcccccaagcacaaaagttggaggacggtcaa
gatccggttctgatgaccacagtggcaatgccagtgttcagtaccaagaacgagactaga
aaccgtggcatcctactaggggtggttgggacagacgtgcctgtctctgagctgctcaag
accatccccaaatataagctgggcattcacggctacgcctttgcaatcaccaacaacggc
tacatcctcacccatccagatctacggccactttatggagatggcaagaagcgaaggaag
ccaaactacagcagtgtggatctgtctgaggtggaatgggaggataaggatgacacgctg
agaaatgccatggtcaacaggaagacagggaccttctccatggaggtgaagaagagtgtt
gacaaagggaaacgtgtactggtgttgcataatgattactactacacagacatcaagggg
actcctttcagtctaggggtagctctttccagaggccacgggaagtttttcttcagaggg
aatgtcacagtggaggaaggacttcatgacttggagcatcctgatgtagcgctggcagac
gaatggacatactgtaacacagacgagcatccagaacatcgctacctgtcccagatagag
gctatcaaactatacctcagtggacacgaaccccacctacaatgtgacaaggaactgatt
caggaggttctctttgacgcggtggtgactgcccctttggaggcctactggacgagcctc
gtgctcaataagtctgagaactctgataaaggggtggagatagcctacctgggtacaaga
acaggcctgtccagaattaacctgtttgtggtgcctgatgagcttacaaaccaagacttc
ctgacagctgaagacaaagagggggtgttcaacgctgatcactttcccctgtggtacaag
agagcagcagaacaagttcctggtacctttgtctactctctacctttcaacacaggatca
gaaaacaagagtgttgtattggccagcactgccattcagcttctggatgagaggaaatca
cccatagctgcggctgtgggcatccagatgaaactggagttctttcagaagaaattctgg
acagccagcagacagtgtgcagcattagatgggaaatgctccataagctgtgacgatgag
aacattaactgctacctcattgacaacaacggcttcattctggtagcagaggactatact
ctgacagggaaattttttggagaagcagagggagctgtaatgagtaagcttctgcagatg
ggctctttcaagagggtcactctgtatgactatcaggcactatgttgggttttttcagag
agtagtgacagcggacacacactgttggatccttactttgctttcttctcagccatgaag
tggatgctgactgagcttgtaatattcctggtcgagtttaacttgtacagctggtggtac
tctgacctcacagctaaagctcagaggatgggtcggaccatgcaggtaccatgtgacaca
gagtacccggccttcatctccgagagaaccatcaaagagaacacaggcaaccttgactgt
gatggctgcatcaactcctgttactctaccaggaccttttgttatacgcttttagctgca
tttgcacgaagagccgctggaaggtcctttgtgatccagcagatccccagcagtaatctc
ttcatggtggtggtggacaacaagtgtgactgcagcatgtttgagccaatcaccatggac
cccatcgaaatcatgtataatgaatctctaaagtgcgagagattgaagatgcaaaaggac
aggaggagaccagatacctgtcatccttttcaccctgaggagaactcaatggagtgcgga
ggagctgtggttcttgctccgtctcttgcagcaacactgctctgcgtccttctggcgctg
ttccctaggtga
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