Siniperca chuatsi (mandarin fish): 122882517
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Entry
122882517 CDS
T08948
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122882517 (fgd1)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
FYVE_2
RHG20_PH
zf-RING_5
C1_1
Motif
Other DBs
NCBI-GeneID:
122882517
NCBI-ProteinID:
XP_044065933
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Position
LG10:complement(30942181..30978261)
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AA seq
1063 aa
AA seq
DB search
MQLNQPPGGLLGFSLPPPPPPPPPPSFSSQFSTMRFSYHLSTASTAPPHSSSTCRTGPSS
SSPTLLTKSLSLEPSCSPCGHQGALDADAPQQPSSDPGPSSSSSGPASLGGGAELTERRG
SDNGLLLVNDTGPPELPATTITPPSKSRPPLPGPKPQVPPKPPHLQQQAGVSRPRPRAPD
KPLPPPPPCRPLPADPRGGRTPPTRAEGTASPTCVLSLIEKFEREQIIVVPDITGGALCP
RLPDPSSSRPSSPPSSSSPAPPPPDEELPSEIKGHDDVTLGVEGEEGDGDLHNEHDDDDD
DDEELAAACRDDLHQKRLSMESGYSASEKPLEDDVVAVEMREQQQQQPLLDQSELPSERL
SLPSSQTDGKLANRDSGIDSISSPSHSEELCFTGVDDGGVAYPCSPALLPHLSSSSSYAG
EGGDEEGEEARGGARRRREFSEEGDSDLEEEEAELTLVLPPPKTDRQDSAELSVQQRVFN
IANELLHTETAYVSKLHLLDQVFCARLLEEARSRSSFPCDVVQGIFSNICSIYCFHQQFL
LPALQKRMEEWDSNPRIGDILQKLAPFLKMYGEYVKNFDRAMELVNTWMERSAQFKTIIQ
EIQREERCGNLTLQHHMLEPVQRIPRYELLLKDYLHRLPEDAPDYRDAQKSLELIATAAE
HSNAAIRKMERMRKLLKVYELLGGEEDIVNPTNELIKEGHILKLSNKNGTTQDRYLILFN
DRLLYCVPKLRLIGQKYGVRARIDVDGMELKETSSVAVPRTFLVSGKQRSLELQARTEED
KKDWIQAIQATIQRHEQTMESFRHLNCSLRDDEVTSNSSSSSSSLSQSCVELGKRAPTPI
REKEVTLCMKCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLSYDNNRTNRVCVDCYAM
LVGVSPSPATLTSSTHRRRSILEKQASLAAENSVICSFLHHMEKGGGRGWQKAWFVVPEN
EPLVLYIYGAPQDVKAQRSVPLIGFDVSLPESCDRLERRHAFKISQSHLTLYFSADGEEL
QRRWMDVLSRAGRGEEHQVHRSIVESLEEEGEELAAAAEGENT
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaccagcctcccggcggcctgctcgggttcagcctcccgcctcctcctccc
cctccccctcctccctccttctccagtcagttcagcaccatgaggttctcttaccacctg
agcaccgcctcgacagcaccaccacacagcagctccacctgcaggacaggtccctcctcc
tccagtcccactttgctgactaagagtctctctctggagccgtcctgctcaccgtgcggc
caccagggggcgctggacgctgacgctccccagcagccgagttccgacccggggccaagc
tcctcttcatcaggccccgcctccctggggggaggggcggagctaaccgagcgccgcggc
tctgataacgggctgctgctggtgaacgacacggggccgccggagctgccagctaccaca
ataacaccaccgagcaagagcagaccgccgctgcctggaccaaaaccccaggtcccccca
aagcccccgcacctccagcagcaggcaggggtgtcgaggccacgcccccgggccccagac
aagcccctgccccctcccccgccatgcagacccctaccggcggacccccgggggggccgg
actccacccacccgtgccgaaggcaccgcctccccgacctgcgtcctgtcactcatcgag
aagtttgagcgcgagcagatcattgtggttcctgacatcaccgggggagctctgtgtccc
cgcctccctgacccctcctcctcccgaccttcatcaccaccttcatcatcatcgcccgcc
cctcccccacctgatgaggagctgccctctgagatcaaaggtcatgatgacgtcacactg
ggggttgagggggaggagggagacggtgacctgcacaatgaacatgatgatgatgatgat
gatgatgaagagctggcggcggcgtgtcgtgacgacctccatcagaagcgtctctccatg
gagtcgggttacagcgcctccgagaaacccctggaggacgacgtggttgccgtggagatg
agggagcaacaacagcagcagccgctcctcgaccaatcagagctcccctcggagcgtctg
tctctcccctcctcgcagacggacgggaagctggccaatcgggacagcggcatcgacagc
atcagctctccgtcgcacagcgaggagctctgcttcaccggcgtggacgacgggggtgtt
gcgtacccctgcagccccgccctcctgccccacctctccagctcatcctcgtacgcgggg
gagggaggggatgaggagggggaggaggcgcggggcggagccaggaggaggagggagttc
tctgaggaaggagacagcgacctggaggaggaggaggccgagctgacgctggtgctgccc
ccccccaagacagacagacaggactctgctgagctgtctgtccagcagagagtcttcaac
atcgccaacgagctgctgcacacagagaccgcctacgtctctaagctccacctcctggac
caggttttctgtgcccgactcctggaggaggctcggtctcgctcctccttcccctgtgac
gtcgttcagggcatcttctccaacatctgctccatctactgtttccatcagcagtttctg
ctgccggcgctgcagaagcggatggaggagtgggactcgaacccgcggattggggacatc
ctgcagaagctggctcccttcctgaagatgtacggcgagtacgtgaagaactttgaccga
gccatggagctcgtgaacacctggatggagagatcggctcagttcaagaccatcatccag
gagatccagagggaggagcgctgtgggaacctgactctgcagcatcacatgctggagccg
gtccagaggattcctcgctacgagctgctgctcaaagattatctgcaccgactgccagag
gacgcgccggactacagggacgcccagaagtctctggagctgatcgccacggcagcagaa
cactccaacgccgccatcaggaagatggagcgaatgaggaagttgttgaaggtgtacgag
ttgttgggaggagaagaagacatcgttaacccgacaaacgagctcataaaagaaggacac
atcctcaaactgtccaacaagaatgggaccacgcaggacagatacctcatactgtttaat
gacaggttgctgtactgtgtcccgaagctgcgtctcattggtcagaagtacggcgtccgt
gctcgcattgatgtggacggtatggagctgaaggagaccagcagtgttgcagttcccagg
acgttcctggtgtctggaaaacagagatcactggagctgcaggccaggacggaggaggac
aagaaagactggatacaggccatccaggcgaccatccagagacacgagcagacgatggag
agcttcagacatctgaactgttcgctgcgagacgacgaggtcacttctaactcttcgtct
tcatcttcatctctgtctcagagctgtgtggagctggggaagagagctccgactccgatc
agagagaaggaagtcacgctgtgcatgaagtgtcaggagccgttcaactccatcaccaag
agacgacatcactgtaaagcctgcggacacgtggtttgtgggaaatgttcagagtttcgt
gctcgcctgtcgtacgacaacaaccgaaccaaccgcgtttgtgtcgactgctacgccatg
ctggtgggagtgtcgccctcgcccgccacgctgaccagcagcacccacaggaggcgctcc
atcctggagaaacaggcctccctggcagcagagaacagtgtgatttgtagttttcttcac
cacatggagaaaggaggggggcggggctggcagaaggcctggttcgtcgtccctgaaaac
gagccgctggtgctctacatctacggagctccgcaggacgtgaaggcgcagcgcagcgtg
cctctgattgggttcgacgtctcccttcctgagtcatgtgaccgcctggagcgacgccac
gccttcaagatctcccagagtcacctgacgctgtacttcagcgctgacggggaggagcta
cagcggcgatggatggacgtcctgtcaagggccgggagaggggaggagcatcaggtccac
cggtcaatcgtggagagtctggaggaggagggggaggagctagcggctgcagcagagggc
gagaacacgtga
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