Siniperca chuatsi (mandarin fish): 122882704
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Entry
122882704 CDS
T08948
Symbol
cacna1db
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
schu04020
Calcium signaling pathway
schu04218
Cellular senescence
schu04260
Cardiac muscle contraction
schu04261
Adrenergic signaling in cardiomyocytes
schu04270
Vascular smooth muscle contraction
schu04530
Tight junction
schu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122882704 (cacna1db)
04020 Calcium signaling pathway
122882704 (cacna1db)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
122882704 (cacna1db)
09144 Cellular community - eukaryotes
04530 Tight junction
122882704 (cacna1db)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
122882704 (cacna1db)
09153 Circulatory system
04260 Cardiac muscle contraction
122882704 (cacna1db)
04261 Adrenergic signaling in cardiomyocytes
122882704 (cacna1db)
04270 Vascular smooth muscle contraction
122882704 (cacna1db)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122882704 (cacna1db)
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122882704 (cacna1db)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
EFTUD2
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
122882704
NCBI-ProteinID:
XP_044066315
LinkDB
All DBs
Position
LG10:complement(11516541..11635632)
Genome browser
AA seq
2280 aa
AA seq
DB search
MPFIIRGRPLRGAQYANNRRTTPSTDASALWSESHTRLHQLHPPEPLQAPPSTGQPVGSS
YGLLGANSGIQGPGGTGSGVSPVLAWHAAISAARQAQGDDAKPDMNSRPSVCTTGPPPVG
SLAQRKRQQYAKSKKQGGSSNSRPPRALFCLSLNNPIRRACISLVEWKPFDIFILLSIFA
NCVALAIYIPFPGDDSNSTNQELETVEYAFLIIFTIETFLKIIAYGLVMHQNSYVRNGWN
MLDFVIVIVGLFSVVLEMITKDADSGGQSGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQ
VVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYVIQTGALMEEESTPCA
VSGHGRHCLLNGTVCREGWQGPNNGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDAMG
FELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGY
LDWITQAEDIDPENEEEGDAEGKRNRVTLADLTEKKKGKFGWFTQSTETHASMPASETES
VNTENHTGVEDKSPCCGPLCQKITKSKCSRQWRRWNRFCRRKCRAAVKSVTFYWLVIILV
FLNTLTIASEHYNQPDWLTEVQDVANKVLLAMFTLEMLVKMYSLGLQAYFVSLFNRFDCF
VVCGGIIETILVELAIMSPLGISVFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASL
LLLLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLTVFQILTGEDWNTVMYD
GIMAYGGPASSGMVVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEEEARK
RKNSAKNASTDKKRVEIIEGKDGENTVPAEVLLEEDKESYPTIDSPVCDDDDNNDGLPEV
PSGLRSQRLSELSIKEKTPPIPVGSAFFIFSSTNPFRVFCHKLINHQIFTNLILVFIMLS
SVSLAAEDPIRNFSARNIILGYFDYAFTAIFTVEILLKMTAFGAFLHKGAFCRNYFNLLD
LLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIM
IVTTLLQFMFACIGVQLFKGKFYRCTDDAKSSPEECKGTYILYHNGDAALPMVKERIWYN
SDFNFDNVLMAMMALFTVSTFEGWPTLLYKAIDSNRENMGPIYNYRIEISIFFIIYIIII
AFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFW
YVVNSTGFEYVMFVLIILNTLCLAIQHHGQSHLFNYAMDILNMVFTGVFTVEMILKLIAF
KPRGYVGDAWNVFDALVVIGSVVDIILSQNYFADAWNTFDALIVVGSVVDIAITEINSAA
IPVVKVIVEPGNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVA
LLIAMLFFIYAVIGMQVFGKIAMVDGTQINRNNNFQTFPQAVLMLFRCATGEAWQEIMLA
CLPGKLCDSESDYNPGEERTCGSGFAIIYFISFYMLCAFLIINLFVAVIMDNFDYLTRDW
SILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAM
NMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVP
AAGDDEVTVGKFYATFLIQDYFRKFKRRKEQGLVGRRSWERLNTTMALQAGLRTLHDIGP
EIRRAISCDLQQEGLVDANAEEEEEIYRRNGSLFGNHVNHASADQQGYSHPTTVTQRPLQ
ILPFSCSASVEPTKRGRRASNDDRGGETDMNSSPIQYNHHYHTPHPSNYPHCISTCHQSP
IPSNANLNNANVPSLLSMTNGRQQKCLLRRDCPSSTKNGSSVSTCSKGVHDKPWKSHSTG
TRYYEAYIRSESGGGLYPTIRREEPGGGDSDDERGSGEYYSGEDFYEDDIMLTRDRLSNK
DNHDAEGDSDLEVSRGDHQPGYYDDDQQPIYQDGRRSPRRWFLPSPQASSRPTFSFECLR
KRSSQDEAPPSPSCTALPLHLMQQQTCELQPQVMAVAGLDASGIHHLSPARSQCSWATPP
ASPISRDCSPCYTPLIQVDWRSSGSVGSIPAVVKRSLWYTDSQEGPPSRSLSPSRLQLPA
ESCSHFLQKRGSANSLVEAVLISEGLGKYARDPKFVSVTKHEIADACEMTIDEMDSAASN
LLNGSMDKGNTGGTGNVSSDPHATAHLRDHSIGDYSDEEPYVAVKCEEDLTDEMICITSL
NT seq
6843 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcattataaggggaagacccctgaggggggcacagtatgccaacaacagaagg
accactccctctactgatgcctcggcgctctggtcagaaagccacacccgtctgcaccag
ctccatccaccagagcccctgcaggccccacccagcactggccagcccgtcggctcctct
tatggcctcctcggggccaacagtggcattcagggccccggtggcactggttccggtgtc
agcccagtcctcgcttggcatgccgccattagcgctgctcggcaagcacagggcgatgat
gcaaagcccgacatgaattcacggccctcagtttgcaccactggaccacctcctgtgggc
tcactggcgcagaggaagaggcagcagtatgccaaaagcaaaaagcagggaggatcttcc
aacagcagaccacccagagctctgttctgcctcagcctcaacaacccgatccgcagggcg
tgcatcagcctggtggagtggaaaccatttgatatctttatactgctgtctatttttgcc
aactgtgtggccttagccatctacatccccttccccggagatgactccaactctaccaac
caagaactggaaacagtagaatatgccttcctgatcattttcactatagagacatttctg
aagattattgcctatggcttggtcatgcaccaaaactcctatgtcagaaacggctggaac
atgctggactttgtcatcgtcatagtggggttgttcagtgtggttctggagatgataacc
aaagacgctgactctggcggccagtctggaggcaaacctggggggtttgatgtcaaggcc
ctccgagcctttcgcgtgctacgaccccttcgccttgtctcaggagttcccagtttacag
gtggttttaaactccattattaaagccatggttcccctgcttcacatcgctttgctggtc
ctcttcgtcattatcatctacgccatcatcggcttggagctcttcattggcaaaatgcat
gccacgtgctacgtgatacaaacaggtgccctcatggaagaagagtccacgccgtgtgca
gtgtcagggcacggccgtcattgcctgctcaatggtacagtttgcagagagggctggcaa
ggccccaacaacggcatcaccaactttgacaattttttgtttgccatgctcactgtgttc
cagtgcatcaccatggagggctggacagatgttctctactggatgaatgatgcaatgggc
tttgagctgccgtgggtctactttgtcagtcttgtcatttttggatccttctttgttctc
aacttggttttgggtgtgttgagcggagagttttccaaagagcgagagaaggccaaggct
cggggagatttccagaagctacgtgagaagcagcagttagaggaagacctgaagggctac
ctagactggatcacccaggccgaggacatcgacccagagaacgaggaggagggcgatgca
gagggcaagcggaaccgggtcacgctggctgacctcactgagaagaagaaaggaaagttt
ggctggttcactcagtccacagagacacatgcgagcatgcccgctagtgagacagagtcg
gtgaacacagagaatcacactggagtggaggacaaatcaccctgctgtggaccgctgtgt
caaaaaattactaagtcaaagtgcagtcgtcagtggcgacggtggaaccgtttctgccgc
aggaagtgtcgtgcagccgtgaaatcggtgacgttttattggctggtcatcatcttggtg
ttcctcaacactctcaccatcgcttctgagcactacaaccagccagactggctgactgaa
gtacaggatgtagccaacaaagttctcctggcaatgttcaccttggagatgctagtgaag
atgtacagtttgggcctgcaggcctactttgtgtccctatttaaccgctttgactgtttc
gtggtgtgtggaggcatcatagagaccatcctggtggagctggccatcatgtctccgctg
ggtatctccgtttttcgctgcgtacgactccttagaatcttcaaggttacacgtcattgg
gcatctcttagtaacctggtggcctctctgctcaactccatgaagtccatcgcctccttg
ttgctgctgctcttcctcttcatcatcattttctccctgcttggcatgcagctttttggg
ggaaagttcaactttgacgagactgtgaccaaaaggagcacgtttgataacttcccccag
gccctgctcactgtgttccagatcttgacaggagaagactggaatacggtgatgtatgac
ggtatcatggcgtacggtggtccggcctcctctggaatggtggtctgcatttatttcatc
atcctcttcatctgtggaaactacatactgctaaacgtcttcttggccattgctgttgac
aacctggcagacgcagagagcctcaacacagcacagaaggaggaagaagaggccaggaag
aggaagaatagtgccaagaatgcaagcacagataagaagagagttgaaataatagaaggc
aaggatggagagaacacggtgccagcagaggtcttgctggaggaagacaaagagtcgtat
cctaccatcgactctccagtgtgtgacgatgacgacaataatgacggcctcccagaagtc
ccgtcagggctccgctctcagaggctgtctgaactcagcatcaaagagaagactccgccc
atcccggtgggcagcgccttcttcatcttcagcagcactaacccgtttcgcgtattctgc
cataagctgatcaaccatcagatcttcaccaacctcatcctggttttcatcatgctcagc
tctgtctctcttgctgctgaggacccaatacgcaacttctctgctcgcaatattatactt
ggttattttgactatgctttcaccgcaatctttactgttgagatcctgttgaagatgaca
gcgtttggagcattccttcataaaggggcgttctgtaggaactacttcaaccttttagac
ctgctggtcgttggtgtgtctctggtctccttcggcattcagtcctctgcaatctcagtg
gtgaagattctccgtgttttgagagtcctccgtccactcagggccatcaacagagccaag
ggactaaagcacgtggtccagtgtgtgtttgtggccatcaggaccatcggtaacatcatg
attgttaccacgctgctgcaattcatgttcgcttgtatcggagtgcagcttttcaaggga
aagttttatcgctgcaccgatgatgcaaagtccagcccagaggagtgcaaaggtacctac
attctctatcacaatggggacgcagcgctgcccatggtgaaagagaggatctggtacaac
agtgacttcaactttgacaatgtcctcatggccatgatggctctttttactgtctccacc
ttcgaaggatggcccactctgctgtacaaggccattgactccaacagagagaacatgggt
cccatctacaactaccgcatcgagatctccatcttcttcatcatctacatcatcatcatc
gccttcttcatgatgaacatctttgtcggtttcgttattgtcacctttcaggagcaggga
gagaaggagtacaagaactgcgagctggacaagaaccagcgtcagtgtgtggaatatgct
cttaaagctcgtcctctgaggcgctacatccccaaaaatccctaccagtacaagttctgg
tatgtggtcaactctactggctttgagtacgtcatgtttgtcctaatcatcctcaacacc
ctgtgtctggccattcagcaccatggtcagtctcatctgtttaactatgccatggacatc
ctcaacatggtcttcactggggttttcactgtggagatgatcctcaagctcatcgccttc
aaacccagaggctatgtcggggacgcctggaatgtcttcgatgctctggtggtgattggc
agtgtagtcgacatcatactcagccagaactattttgctgatgcatggaacacgtttgat
gccttaattgttgtgggtagcgtggttgacattgccatcactgagatcaattcggcagcc
attcctgtcgtcaaggtgatagtggagccagggaacacggaggacagtgctcgcatctca
atcaccttcttccgcctgttcagagtgatgcgattagtcaaactgctgagcaggggggag
ggcatcaggactctgctgtggaccttcatcaagtcctttcaggctcttccctatgttgca
ctcctaatagccatgctgttcttcatctatgctgtaattggaatgcaggtgtttggaaaa
atagccatggtggatggaacacaaatcaaccgcaacaacaactttcaaacctttcctcaa
gctgtcctgatgctcttcaggtgtgccacaggtgaggcctggcaggagatcatgctggcc
tgtctaccagggaagctgtgtgattcagagtcggactacaaccccggagaggagagaacc
tgcggcagcggcttcgccattatctacttcattagcttctacatgctctgtgctttcctg
atcatcaacctatttgtagctgtcatcatggataactttgactatctgactcgtgattgg
tctattcttgggccacatcacctggatgagtttaaaaggatctggtccgaatatgaccct
gaagccaagggcaggataaagcaccttgatgtggtgactctgctgaggaggatccagcct
ccgctgggcttcggcaagctctgccctcacagagtggcctgtaagcgtctggtggcgatg
aacatgcccctgaacagtgatgggactgtcatgtttaatgccaccttgtttgctctggtc
cgcactgctctcaagattaagactgagggtaacctggagcaagcgaatgaggagcttcga
gctgtgatcaagaagatctggaagaggaccagcatgaagctgctggaccaagtggtgcct
gctgcaggcgatgacgaggtaacagtggggaagttctatgccaccttcctgatacaggac
tacttcaggaagttcaagaggcgcaaagagcaaggtcttgtaggaaggcgctcatgggag
aggctcaacaccaccatggctctacaggccggtctgcgcacgctgcatgacattggacca
gagattcgtcgagccatatcatgtgacctgcaacaggaggggctagtagatgctaatgca
gaggaagaagaggaaatctacaggcgtaatggcagtctttttgggaaccatgtcaaccat
gccagtgcggatcagcaaggctactcccacccgaccactgtcacccaacgaccgttacag
atcctgcccttctcctgcagtgcctcagttgaacccaccaaaagaggaagaagagccagc
aacgacgacagaggaggggagacagacatgaactcttcacctatccagtataatcatcat
tatcacacccctcatccgtctaattatcctcactgtatttccacttgccatcaatcgcca
ataccctccaatgccaacctcaacaatgccaatgtgccctcacttctctccatgaccaat
gggaggcagcagaagtgtttgttaaggcgagactgtccatcctccaccaaaaatggatca
tcagtgtccacttgcagcaaaggagtacacgacaagccttggaagtcacactccacaggg
acacgctactatgaagcctacattaggtcagaaagcggcggtggactctatcccaccatt
cgccgagaggagccagggggcggggacagcgatgacgagcgaggctcaggggagtactac
agtggggaggatttttacgaggatgacatcatgctcacaagggacaggttgtccaacaag
gacaaccatgatgcagaaggagactctgaccttgaggtttccaggggcgaccaccagcct
ggttattatgacgatgaccaacagccgatctaccaagatggcaggcgatcacccaggaga
tggtttttaccctcacctcaagcctccagcagaccaacattcagttttgagtgtcttcgc
aaaagaagtagtcaggatgaggctcctccctctccatcctgcacagctcttccactacac
ctgatgcagcaacagacctgtgaactccaacctcaggtaatggcggtggccggtcttgat
gccagcggaattcaccacctgtctcctgcacggtcgcaatgctcctgggccacgcctcct
gcctcacccatcagccgtgactgctcgccctgctacacaccactcatacaggtggactgg
cgcagttccggcagcgtgggcagcatccccgcagtggtgaagaggagtttgtggtataca
gacagccaggaaggtcctcccagccgcagcctctctccgtcacgtctgcagttacctgca
gagagctgctcacacttcctgcagaagagaggcagtgccaacagtctggtggaggctgtg
ttgatctccgagggtctggggaaatatgccagggaccccaagtttgtgtcagtgaccaaa
cacgaaattgcagacgcctgcgagatgaccatcgatgagatggacagtgctgctagtaac
ctcctgaacgggagtatggataaaggcaacactggggggacagggaacgtcagttcggac
ccacatgccaccgcgcatcttagagaccacagtatcggtgactacagcgacgaggagccg
tacgtggctgtgaaatgcgaggaggacctaacagacgagatgatatgcatcacatcgcta
tag
DBGET
integrated database retrieval system
