Siniperca chuatsi (mandarin fish): 122882708
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Entry
122882708 CDS
T08948
Symbol
dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122882708 (dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122882708 (dcp1a)
03036 Chromosome and associated proteins [BR:
schu03036
]
122882708 (dcp1a)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122882708 (dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
122882708 (dcp1a)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122882708 (dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
122882708
NCBI-ProteinID:
XP_044066322
LinkDB
All DBs
Position
LG10:11635750..11648046
Genome browser
AA seq
506 aa
AA seq
DB search
METVNSGHMMSLAALQRQDPYINKLLDVTGQVALYNFNSKANEWEKTEIEGTLFVYARSA
SPHHGFTIMNRLNTENLVEPINKDLEFQLQDPFLLYRNGNLGIYSIWFYDKSDCQRIAKL
MVKIVKQEADQAQRESPERAEPRRTNGVAEPRPIDILELLSKAKEEYQRAQAGETDVSAE
PNVKAAINATEHAHSTPQPEKSSHTMVKQITVEELFGSSLPKDPSIPTMPAQNTTTASSD
PSTAYLQNQSYPTPAHQNPLLPHLAAKDPRSKHQHQAPGLLPAQYALHPTPVFQSAVPRS
DPQPLCSVSPLMVPPAGSEPHAAPSGPAAPSAVPTAYLGQEVLSTLKPAVPCVNSDIHKP
ILAPNFLPSTLFPPRSFQEPMGKPPLQHNKEIDVFSQPSNLIKPMSAVPMSPGLAVPGPE
ISVLLSPSAFQQSINKTTTAASVVPPAPSEPSSTSVGVLESPHAPCSKSQLQETLIHLIK
NDPDFLSAIHDAYLQSLPQDFSNMKL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgtaaattctggacatatgatgagcttagcagctctacagagacaagaccca
tacataaacaaactgcttgatgtaaccggccaggtggctctctataacttcaattccaaa
gcgaacgaatgggagaagaccgaaatcgagggcaccctgtttgtttatgcaaggtctgcc
tcgcctcaccatggcttcaccatcatgaaccgactgaacacggagaacctggtggagccg
atcaacaaagacctggagttccagctgcaggatcccttcctgctctataggaacggcaac
ttgggtatctacagcatttggttctatgacaagagcgactgtcaacgcatcgctaagctg
atggtcaagattgtgaaacaagaagcagaccaggcccagagagagtcgccagagagggca
gagccacggaggaccaatggtgtcgctgaaccacggcccatcgacatcctggaactgctc
agcaaagccaaggaggaataccagagagctcaggcaggtgaaacagatgtgtctgcagag
cctaatgtgaaagcagctatcaacgccacagagcatgcgcacagcacaccacaacctgaa
aagagctctcatacaatggtgaagcagatcacagttgaggagctctttggctcgtccctc
cctaaggacccctctatacccaccatgcccgcacagaacaccaccactgcttccagtgac
ccctccactgcttacctccagaaccagtcttatcccactccagcccaccaaaacccactc
cttccccacctcgcagccaaagaccccaggtcaaagcatcagcaccaagcccctggcctg
ctcccagctcagtacgcactacaccccactcctgttttccagtcggccgtccccaggtca
gacccccaacctctgtgctcagtctcccctctcatggtgcctccagctggctcagagcct
catgctgctccctctggtcctgcagcaccatctgcagttcctacagcctatttgggacag
gaggtactcagcacactcaaaccggcagtgccatgtgttaattcggacatccacaaaccc
atcctcgcacccaacttcctgccaagcacgctgttcccaccccgcagctttcaagagccc
atggggaaaccccctctccagcacaacaaggagatagatgttttctctcagccttcaaac
ctgatcaaaccaatgtctgccgtccccatgagtccaggtcttgctgttccagggccggag
atttctgtgcttctctcccccagcgccttccagcagtccatcaataagacaacaacagca
gcatcagtggtccctcctgccccgtctgagccctcctccacctctgtaggagttttagag
tctccacatgccccctgcagcaaatcacagctacaggagactctgatacacctcattaag
aatgacccagacttcctcagtgccattcatgatgcttacctgcagagtctgcctcaggac
tttagcaacatgaagctatag
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